Hb_029866_010

Information

Type -
Description -
Location Contig29866: 133-1301
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029866_010 0.0 - - -
2 Hb_013983_010 0.0571134842 - - hypothetical protein PRUPE_ppa016763mg, partial [Prunus persica]
3 Hb_001125_030 0.0894304029 - - conserved hypothetical protein [Ricinus communis]
4 Hb_033225_020 0.0984245315 - - conserved hypothetical protein [Ricinus communis]
5 Hb_059126_010 0.1151138192 - - -
6 Hb_000345_480 0.1328023087 - - cyclin-dependent protein kinase, putative [Ricinus communis]
7 Hb_081636_010 0.1426946276 - - -
8 Hb_001584_230 0.1503321323 - - invertase/pectin methylesterase inhibitor family protein [Populus trichocarpa]
9 Hb_003494_260 0.1725878549 - - -
10 Hb_114868_010 0.1760432735 - - -
11 Hb_000153_040 0.1820394464 - - -
12 Hb_001135_270 0.1827565915 - - -
13 Hb_005799_030 0.1835185404 - - PREDICTED: uncharacterized protein LOC103926623 [Pyrus x bretschneideri]
14 Hb_002983_100 0.1877105013 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF084 [Jatropha curcas]
15 Hb_005116_020 0.190153168 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Sesamum indicum]
16 Hb_000123_390 0.2052939266 - - conserved hypothetical protein [Ricinus communis]
17 Hb_134732_010 0.2180915968 - - -
18 Hb_156144_020 0.228401975 - - PREDICTED: uncharacterized protein At5g65660 [Vitis vinifera]
19 Hb_075570_010 0.2384434427 - - -
20 Hb_000236_270 0.2442561399 - - ATP-binding cassette transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_029866_010 Hb_029866_010 Hb_013983_010 Hb_013983_010 Hb_029866_010--Hb_013983_010 Hb_001125_030 Hb_001125_030 Hb_029866_010--Hb_001125_030 Hb_033225_020 Hb_033225_020 Hb_029866_010--Hb_033225_020 Hb_059126_010 Hb_059126_010 Hb_029866_010--Hb_059126_010 Hb_000345_480 Hb_000345_480 Hb_029866_010--Hb_000345_480 Hb_081636_010 Hb_081636_010 Hb_029866_010--Hb_081636_010 Hb_013983_010--Hb_000345_480 Hb_013983_010--Hb_001125_030 Hb_003494_260 Hb_003494_260 Hb_013983_010--Hb_003494_260 Hb_000153_040 Hb_000153_040 Hb_013983_010--Hb_000153_040 Hb_013983_010--Hb_081636_010 Hb_001125_030--Hb_059126_010 Hb_001125_030--Hb_033225_020 Hb_001125_030--Hb_000345_480 Hb_001125_030--Hb_000153_040 Hb_033225_020--Hb_059126_010 Hb_033225_020--Hb_013983_010 Hb_001584_230 Hb_001584_230 Hb_033225_020--Hb_001584_230 Hb_002983_100 Hb_002983_100 Hb_033225_020--Hb_002983_100 Hb_059126_010--Hb_013983_010 Hb_000008_050 Hb_000008_050 Hb_059126_010--Hb_000008_050 Hb_059126_010--Hb_002983_100 Hb_000345_480--Hb_003494_260 Hb_000345_480--Hb_000153_040 Hb_075570_010 Hb_075570_010 Hb_000345_480--Hb_075570_010 Hb_132629_010 Hb_132629_010 Hb_000345_480--Hb_132629_010 Hb_001135_270 Hb_001135_270 Hb_081636_010--Hb_001135_270 Hb_005799_030 Hb_005799_030 Hb_081636_010--Hb_005799_030 Hb_081636_010--Hb_001584_230 Hb_067345_050 Hb_067345_050 Hb_081636_010--Hb_067345_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0329819 0 0 0 0.0972289 0.0292227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis