Hb_022693_150

Information

Type -
Description -
Location Contig22693: 296642-299692
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022693_150 0.0 - - -
2 Hb_084426_010 0.1529773892 - - -
3 Hb_000362_240 0.1753465903 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000479_120 0.2447699247 transcription factor TF Family: FAR1 FAR1-related sequence 5 [Theobroma cacao]
5 Hb_000008_050 0.2462948525 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
6 Hb_001364_020 0.2665402947 - - -
7 Hb_000922_310 0.2681500459 transcription factor TF Family: MYB PREDICTED: transcription factor MYB98-like [Jatropha curcas]
8 Hb_005867_010 0.2689137241 - - -
9 Hb_092043_020 0.2689782872 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
10 Hb_003362_060 0.2724491332 - - -
11 Hb_131949_010 0.2740242641 - - PREDICTED: uncharacterized protein LOC104227863, partial [Nicotiana sylvestris]
12 Hb_007127_010 0.2745465749 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
13 Hb_004529_020 0.2782237445 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
14 Hb_168978_040 0.278991672 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Jatropha curcas]
15 Hb_000038_160 0.2819297171 - - putative gag protein [Coffea canephora]
16 Hb_140049_070 0.2823437248 - - conserved hypothetical protein [Ricinus communis]
17 Hb_023528_010 0.2837903955 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
18 Hb_002805_320 0.2839552399 - - -
19 Hb_002163_060 0.2891790876 - - -
20 Hb_171108_010 0.3192286976 - - -

Gene co-expression network

sample Hb_022693_150 Hb_022693_150 Hb_084426_010 Hb_084426_010 Hb_022693_150--Hb_084426_010 Hb_000362_240 Hb_000362_240 Hb_022693_150--Hb_000362_240 Hb_000479_120 Hb_000479_120 Hb_022693_150--Hb_000479_120 Hb_000008_050 Hb_000008_050 Hb_022693_150--Hb_000008_050 Hb_001364_020 Hb_001364_020 Hb_022693_150--Hb_001364_020 Hb_000922_310 Hb_000922_310 Hb_022693_150--Hb_000922_310 Hb_003362_060 Hb_003362_060 Hb_084426_010--Hb_003362_060 Hb_131949_010 Hb_131949_010 Hb_084426_010--Hb_131949_010 Hb_000171_040 Hb_000171_040 Hb_084426_010--Hb_000171_040 Hb_084426_010--Hb_000922_310 Hb_084426_010--Hb_000362_240 Hb_000362_240--Hb_000008_050 Hb_000362_240--Hb_000479_120 Hb_059126_010 Hb_059126_010 Hb_000362_240--Hb_059126_010 Hb_001125_030 Hb_001125_030 Hb_000362_240--Hb_001125_030 Hb_000362_240--Hb_001364_020 Hb_004650_080 Hb_004650_080 Hb_000479_120--Hb_004650_080 Hb_002983_100 Hb_002983_100 Hb_000479_120--Hb_002983_100 Hb_000479_120--Hb_000008_050 Hb_168978_040 Hb_168978_040 Hb_000479_120--Hb_168978_040 Hb_000008_050--Hb_001364_020 Hb_005867_010 Hb_005867_010 Hb_000008_050--Hb_005867_010 Hb_000008_050--Hb_059126_010 Hb_000038_160 Hb_000038_160 Hb_000008_050--Hb_000038_160 Hb_140049_070 Hb_140049_070 Hb_000008_050--Hb_140049_070 Hb_001364_020--Hb_005867_010 Hb_001364_020--Hb_000038_160 Hb_001364_020--Hb_140049_070 Hb_002805_320 Hb_002805_320 Hb_001364_020--Hb_002805_320 Hb_002163_060 Hb_002163_060 Hb_001364_020--Hb_002163_060 Hb_027393_020 Hb_027393_020 Hb_001364_020--Hb_027393_020 Hb_034569_020 Hb_034569_020 Hb_000922_310--Hb_034569_020 Hb_004899_280 Hb_004899_280 Hb_000922_310--Hb_004899_280 Hb_046727_010 Hb_046727_010 Hb_000922_310--Hb_046727_010 Hb_080765_020 Hb_080765_020 Hb_000922_310--Hb_080765_020 Hb_000098_280 Hb_000098_280 Hb_000922_310--Hb_000098_280 Hb_007008_020 Hb_007008_020 Hb_000922_310--Hb_007008_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.160732 0.0916353 0 0 0.475135 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis