Hb_172864_010

Information

Type -
Description -
Location Contig172864: 78-563
Sequence    

Annotation

kegg
ID rcu:RCOM_1372720
description o-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_012088429.1
description PREDICTED: 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase-like [Jatropha curcas]
swissprot
ID Q6WUC1
description (RS)-norcoclaurine 6-O-methyltransferase OS=Papaver somniferum GN=PSOMT2 PE=1 SV=1
trembl
ID A0A067JWY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26737 PE=4 SV=1
Gene Ontology
ID GO:0008757
description 3 -hydroxy-n-methyl- -coclaurine 4 -o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_172864_010 0.0 - - PREDICTED: 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase-like [Jatropha curcas]
2 Hb_004352_020 0.0366637149 - - o-methyltransferase, putative [Ricinus communis]
3 Hb_000380_070 0.0787461245 - - conserved hypothetical protein [Ricinus communis]
4 Hb_089032_060 0.1541135316 - - Uncharacterized protein TCM_027342 [Theobroma cacao]
5 Hb_032299_030 0.1566901608 transcription factor TF Family: MYB PREDICTED: transcription factor MYB59 isoform X1 [Jatropha curcas]
6 Hb_041177_010 0.1603795191 - - PREDICTED: MLP-like protein 34 [Vitis vinifera]
7 Hb_002641_100 0.1666809719 - - PREDICTED: uncharacterized protein LOC105115446 [Populus euphratica]
8 Hb_005687_020 0.1687090718 - - P66 protein [Hevea brasiliensis]
9 Hb_113388_010 0.1711109421 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000395_160 0.1738285213 - - hypothetical protein POPTR_0006s25490g [Populus trichocarpa]
11 Hb_015784_010 0.1753379709 - - hypothetical protein VITISV_019364 [Vitis vinifera]
12 Hb_003973_050 0.1844399979 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 3-like isoform X1 [Populus euphratica]
13 Hb_004096_040 0.1955271198 - - cytochrome P450, putative [Ricinus communis]
14 Hb_000215_120 0.204204558 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
15 Hb_000979_270 0.2046466291 - - PREDICTED: MLP-like protein 31 [Jatropha curcas]
16 Hb_013057_010 0.2066132439 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]
17 Hb_186671_020 0.2073865607 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_000876_060 0.2074709811 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001922_160 0.2085881806 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
20 Hb_005050_010 0.2085963429 - - hypothetical protein JCGZ_04974 [Jatropha curcas]

Gene co-expression network

sample Hb_172864_010 Hb_172864_010 Hb_004352_020 Hb_004352_020 Hb_172864_010--Hb_004352_020 Hb_000380_070 Hb_000380_070 Hb_172864_010--Hb_000380_070 Hb_089032_060 Hb_089032_060 Hb_172864_010--Hb_089032_060 Hb_032299_030 Hb_032299_030 Hb_172864_010--Hb_032299_030 Hb_041177_010 Hb_041177_010 Hb_172864_010--Hb_041177_010 Hb_002641_100 Hb_002641_100 Hb_172864_010--Hb_002641_100 Hb_004352_020--Hb_000380_070 Hb_004352_020--Hb_089032_060 Hb_004352_020--Hb_032299_030 Hb_005687_020 Hb_005687_020 Hb_004352_020--Hb_005687_020 Hb_000395_160 Hb_000395_160 Hb_004352_020--Hb_000395_160 Hb_000380_070--Hb_089032_060 Hb_113388_010 Hb_113388_010 Hb_000380_070--Hb_113388_010 Hb_000380_070--Hb_032299_030 Hb_000380_070--Hb_000395_160 Hb_089032_060--Hb_032299_030 Hb_089032_060--Hb_113388_010 Hb_089032_060--Hb_000395_160 Hb_000004_150 Hb_000004_150 Hb_089032_060--Hb_000004_150 Hb_000007_170 Hb_000007_170 Hb_089032_060--Hb_000007_170 Hb_032299_030--Hb_113388_010 Hb_032299_030--Hb_000395_160 Hb_032299_030--Hb_000004_150 Hb_032299_030--Hb_000007_170 Hb_000994_010 Hb_000994_010 Hb_041177_010--Hb_000994_010 Hb_001081_040 Hb_001081_040 Hb_041177_010--Hb_001081_040 Hb_041177_010--Hb_004352_020 Hb_041177_010--Hb_000380_070 Hb_033623_010 Hb_033623_010 Hb_041177_010--Hb_033623_010 Hb_002641_100--Hb_004352_020 Hb_001277_140 Hb_001277_140 Hb_002641_100--Hb_001277_140 Hb_002641_100--Hb_000380_070 Hb_082219_010 Hb_082219_010 Hb_002641_100--Hb_082219_010 Hb_001922_160 Hb_001922_160 Hb_002641_100--Hb_001922_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.46382 80.9423 0 0.323372 2.19828 3.33526
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.140679 0 0 0 0

CAGE analysis