Hb_000994_010

Information

Type -
Description -
Location Contig994: 12826-13080
Sequence    

Annotation

kegg
ID rcu:RCOM_1439670
description hypothetical protein
nr
ID KDP28128.1
description hypothetical protein JCGZ_13899 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZ97
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13899 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000994_010 0.0 - - hypothetical protein JCGZ_13899 [Jatropha curcas]
2 Hb_001081_040 0.0385857683 - - hypothetical protein MIMGU_mgv11b021166mg, partial [Erythranthe guttata]
3 Hb_000336_300 0.0790949777 - - -
4 Hb_000016_010 0.1349662673 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
5 Hb_008424_010 0.1362459925 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_041177_010 0.1404881012 - - PREDICTED: MLP-like protein 34 [Vitis vinifera]
7 Hb_005432_050 0.169570998 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
8 Hb_001066_020 0.1918015481 - - PREDICTED: uncharacterized protein LOC104908874, partial [Beta vulgaris subsp. vulgaris]
9 Hb_012278_010 0.1946789293 - - -
10 Hb_102408_010 0.1979251848 - - hypothetical protein JCGZ_27060 [Jatropha curcas]
11 Hb_015784_010 0.2041421638 - - hypothetical protein VITISV_019364 [Vitis vinifera]
12 Hb_133862_010 0.2073131351 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
13 Hb_135941_010 0.2105997154 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
14 Hb_012264_040 0.2220739622 - - -
15 Hb_033623_010 0.2299667668 - - -
16 Hb_004041_070 0.2314762652 - - conserved hypothetical protein [Ricinus communis]
17 Hb_172864_010 0.2540057273 - - PREDICTED: 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase-like [Jatropha curcas]
18 Hb_000876_060 0.2589849207 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004352_020 0.2591662326 - - o-methyltransferase, putative [Ricinus communis]
20 Hb_005687_020 0.2625186489 - - P66 protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_000994_010 Hb_000994_010 Hb_001081_040 Hb_001081_040 Hb_000994_010--Hb_001081_040 Hb_000336_300 Hb_000336_300 Hb_000994_010--Hb_000336_300 Hb_000016_010 Hb_000016_010 Hb_000994_010--Hb_000016_010 Hb_008424_010 Hb_008424_010 Hb_000994_010--Hb_008424_010 Hb_041177_010 Hb_041177_010 Hb_000994_010--Hb_041177_010 Hb_005432_050 Hb_005432_050 Hb_000994_010--Hb_005432_050 Hb_001081_040--Hb_000336_300 Hb_001081_040--Hb_000016_010 Hb_001081_040--Hb_008424_010 Hb_001081_040--Hb_005432_050 Hb_001066_020 Hb_001066_020 Hb_001081_040--Hb_001066_020 Hb_000336_300--Hb_000016_010 Hb_000336_300--Hb_008424_010 Hb_000336_300--Hb_005432_050 Hb_000336_300--Hb_001066_020 Hb_000016_010--Hb_008424_010 Hb_000016_010--Hb_005432_050 Hb_000016_010--Hb_001066_020 Hb_133862_010 Hb_133862_010 Hb_000016_010--Hb_133862_010 Hb_135941_010 Hb_135941_010 Hb_000016_010--Hb_135941_010 Hb_008424_010--Hb_005432_050 Hb_008424_010--Hb_001066_020 Hb_008424_010--Hb_133862_010 Hb_008424_010--Hb_135941_010 Hb_172864_010 Hb_172864_010 Hb_041177_010--Hb_172864_010 Hb_041177_010--Hb_001081_040 Hb_004352_020 Hb_004352_020 Hb_041177_010--Hb_004352_020 Hb_000380_070 Hb_000380_070 Hb_041177_010--Hb_000380_070 Hb_033623_010 Hb_033623_010 Hb_041177_010--Hb_033623_010 Hb_005432_050--Hb_001066_020 Hb_005432_050--Hb_133862_010 Hb_005432_050--Hb_135941_010 Hb_012264_040 Hb_012264_040 Hb_005432_050--Hb_012264_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.464 0 0 0.248727 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis