Hb_012264_040

Information

Type -
Description -
Location Contig12264: 12050-13053
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012264_040 0.0 - - -
2 Hb_135941_010 0.0117508245 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
3 Hb_133862_010 0.0151124794 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
4 Hb_001066_020 0.030952553 - - PREDICTED: uncharacterized protein LOC104908874, partial [Beta vulgaris subsp. vulgaris]
5 Hb_005432_050 0.0535756226 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
6 Hb_003637_030 0.0867859012 - - -
7 Hb_008424_010 0.0872997163 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_000016_010 0.0885898864 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
9 Hb_086484_010 0.1072664542 - - PREDICTED: uncharacterized protein LOC101259761 [Solanum lycopersicum]
10 Hb_102355_010 0.1114273435 - - PREDICTED: uncharacterized protein LOC104094591, partial [Nicotiana tomentosiformis]
11 Hb_002708_010 0.1322259073 - - -
12 Hb_185830_100 0.1338867512 - - -
13 Hb_001863_210 0.1353851233 - - -
14 Hb_006387_010 0.143858601 - - PREDICTED: uncharacterized protein LOC105649124 [Jatropha curcas]
15 Hb_000336_300 0.144518476 - - -
16 Hb_049827_010 0.1474370147 - - PREDICTED: uncharacterized protein LOC105762110 [Gossypium raimondii]
17 Hb_003392_010 0.1504825371 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
18 Hb_001081_040 0.1845095641 - - hypothetical protein MIMGU_mgv11b021166mg, partial [Erythranthe guttata]
19 Hb_000994_010 0.2220739622 - - hypothetical protein JCGZ_13899 [Jatropha curcas]
20 Hb_007943_010 0.2343935654 - - -

Gene co-expression network

sample Hb_012264_040 Hb_012264_040 Hb_135941_010 Hb_135941_010 Hb_012264_040--Hb_135941_010 Hb_133862_010 Hb_133862_010 Hb_012264_040--Hb_133862_010 Hb_001066_020 Hb_001066_020 Hb_012264_040--Hb_001066_020 Hb_005432_050 Hb_005432_050 Hb_012264_040--Hb_005432_050 Hb_003637_030 Hb_003637_030 Hb_012264_040--Hb_003637_030 Hb_008424_010 Hb_008424_010 Hb_012264_040--Hb_008424_010 Hb_135941_010--Hb_133862_010 Hb_135941_010--Hb_001066_020 Hb_135941_010--Hb_005432_050 Hb_135941_010--Hb_008424_010 Hb_000016_010 Hb_000016_010 Hb_135941_010--Hb_000016_010 Hb_133862_010--Hb_001066_020 Hb_133862_010--Hb_005432_050 Hb_133862_010--Hb_008424_010 Hb_133862_010--Hb_000016_010 Hb_001066_020--Hb_005432_050 Hb_001066_020--Hb_008424_010 Hb_001066_020--Hb_000016_010 Hb_005432_050--Hb_008424_010 Hb_005432_050--Hb_000016_010 Hb_086484_010 Hb_086484_010 Hb_003637_030--Hb_086484_010 Hb_102355_010 Hb_102355_010 Hb_003637_030--Hb_102355_010 Hb_002708_010 Hb_002708_010 Hb_003637_030--Hb_002708_010 Hb_185830_100 Hb_185830_100 Hb_003637_030--Hb_185830_100 Hb_001863_210 Hb_001863_210 Hb_003637_030--Hb_001863_210 Hb_006387_010 Hb_006387_010 Hb_003637_030--Hb_006387_010 Hb_008424_010--Hb_000016_010 Hb_000336_300 Hb_000336_300 Hb_008424_010--Hb_000336_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0883434 0 0 0.0521246 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis