Hb_001863_210

Information

Type -
Description -
Location Contig1863: 141298-162643
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_210 0.0 - - -
2 Hb_185830_100 0.0015078934 - - -
3 Hb_002708_010 0.0031790453 - - -
4 Hb_006387_010 0.0085312783 - - PREDICTED: uncharacterized protein LOC105649124 [Jatropha curcas]
5 Hb_049827_010 0.012136124 - - PREDICTED: uncharacterized protein LOC105762110 [Gossypium raimondii]
6 Hb_003392_010 0.0152050898 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
7 Hb_102355_010 0.0240848583 - - PREDICTED: uncharacterized protein LOC104094591, partial [Nicotiana tomentosiformis]
8 Hb_086484_010 0.0282623482 - - PREDICTED: uncharacterized protein LOC101259761 [Solanum lycopersicum]
9 Hb_003637_030 0.0488009509 - - -
10 Hb_007943_010 0.1001125092 - - -
11 Hb_012264_040 0.1353851233 - - -
12 Hb_135941_010 0.1470504249 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
13 Hb_133862_010 0.1503849261 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
14 Hb_001066_020 0.1660806509 - - PREDICTED: uncharacterized protein LOC104908874, partial [Beta vulgaris subsp. vulgaris]
15 Hb_005432_050 0.1884493087 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
16 Hb_125948_020 0.1972344171 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
17 Hb_038190_040 0.1989295038 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
18 Hb_003793_050 0.2054372679 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
19 Hb_008424_010 0.2216830971 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_023528_010 0.2226332543 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]

Gene co-expression network

sample Hb_001863_210 Hb_001863_210 Hb_185830_100 Hb_185830_100 Hb_001863_210--Hb_185830_100 Hb_002708_010 Hb_002708_010 Hb_001863_210--Hb_002708_010 Hb_006387_010 Hb_006387_010 Hb_001863_210--Hb_006387_010 Hb_049827_010 Hb_049827_010 Hb_001863_210--Hb_049827_010 Hb_003392_010 Hb_003392_010 Hb_001863_210--Hb_003392_010 Hb_102355_010 Hb_102355_010 Hb_001863_210--Hb_102355_010 Hb_185830_100--Hb_002708_010 Hb_185830_100--Hb_006387_010 Hb_185830_100--Hb_049827_010 Hb_185830_100--Hb_003392_010 Hb_185830_100--Hb_102355_010 Hb_002708_010--Hb_006387_010 Hb_002708_010--Hb_049827_010 Hb_002708_010--Hb_003392_010 Hb_002708_010--Hb_102355_010 Hb_006387_010--Hb_049827_010 Hb_006387_010--Hb_003392_010 Hb_006387_010--Hb_102355_010 Hb_049827_010--Hb_003392_010 Hb_049827_010--Hb_102355_010 Hb_003392_010--Hb_102355_010 Hb_086484_010 Hb_086484_010 Hb_102355_010--Hb_086484_010 Hb_003637_030 Hb_003637_030 Hb_102355_010--Hb_003637_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0183273 0 0 0.0206122 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis