Hb_003998_010

Information

Type -
Description -
Location Contig3998: 17402-20950
Sequence    

Annotation

kegg
ID rcu:RCOM_0478150
description serine/threonine-protein kinase bri1, putative (EC:2.7.11.25 3.1.3.16)
nr
ID XP_012075271.1
description PREDICTED: protein BRASSINOSTEROID INSENSITIVE 1 [Jatropha curcas]
swissprot
ID Q8L899
description Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1
trembl
ID A0A067KGQ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09441 PE=4 SV=1
Gene Ontology
ID GO:0004672
description protein brassinosteroid insensitive 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003998_010 0.0 - - PREDICTED: protein BRASSINOSTEROID INSENSITIVE 1 [Jatropha curcas]
2 Hb_000588_080 0.1009141979 - - PREDICTED: uncharacterized protein LOC105638459 [Jatropha curcas]
3 Hb_002995_040 0.1194813366 - - PREDICTED: probable serine/threonine-protein kinase dyrk1 isoform X1 [Jatropha curcas]
4 Hb_000318_040 0.1204557378 - - hypothetical protein JCGZ_04877 [Jatropha curcas]
5 Hb_002874_090 0.1209374299 - - PREDICTED: uncharacterized protein LOC105637452 [Jatropha curcas]
6 Hb_000413_070 0.1278303275 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001059_130 0.134483391 - - PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1 [Jatropha curcas]
8 Hb_000334_260 0.1351004728 - - carotenoid cleavage dioxygenase 1 [Manihot esculenta]
9 Hb_007137_050 0.1364781907 - - Uncharacterized protein isoform 1 [Theobroma cacao]
10 Hb_000230_130 0.1365852964 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 7 isoform X1 [Jatropha curcas]
11 Hb_010042_030 0.1375682291 - - PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 [Jatropha curcas]
12 Hb_001558_040 0.1392744245 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
13 Hb_000656_150 0.1403152176 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
14 Hb_000069_480 0.1413590929 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001488_220 0.1413685842 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
16 Hb_001307_240 0.1423814431 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase SUVR2 isoform X2 [Jatropha curcas]
17 Hb_007445_010 0.143483868 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
18 Hb_010315_020 0.143661717 - - PREDICTED: uncharacterized protein LOC105640834 [Jatropha curcas]
19 Hb_028207_060 0.1439273769 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
20 Hb_000085_450 0.1445804513 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 20 [Jatropha curcas]

Gene co-expression network

sample Hb_003998_010 Hb_003998_010 Hb_000588_080 Hb_000588_080 Hb_003998_010--Hb_000588_080 Hb_002995_040 Hb_002995_040 Hb_003998_010--Hb_002995_040 Hb_000318_040 Hb_000318_040 Hb_003998_010--Hb_000318_040 Hb_002874_090 Hb_002874_090 Hb_003998_010--Hb_002874_090 Hb_000413_070 Hb_000413_070 Hb_003998_010--Hb_000413_070 Hb_001059_130 Hb_001059_130 Hb_003998_010--Hb_001059_130 Hb_010315_020 Hb_010315_020 Hb_000588_080--Hb_010315_020 Hb_000588_080--Hb_001059_130 Hb_000020_160 Hb_000020_160 Hb_000588_080--Hb_000020_160 Hb_000069_480 Hb_000069_480 Hb_000588_080--Hb_000069_480 Hb_001194_020 Hb_001194_020 Hb_000588_080--Hb_001194_020 Hb_044486_020 Hb_044486_020 Hb_000588_080--Hb_044486_020 Hb_000334_260 Hb_000334_260 Hb_002995_040--Hb_000334_260 Hb_001558_040 Hb_001558_040 Hb_002995_040--Hb_001558_040 Hb_000579_130 Hb_000579_130 Hb_002995_040--Hb_000579_130 Hb_001307_240 Hb_001307_240 Hb_002995_040--Hb_001307_240 Hb_004450_070 Hb_004450_070 Hb_002995_040--Hb_004450_070 Hb_000085_450 Hb_000085_450 Hb_002995_040--Hb_000085_450 Hb_000318_040--Hb_001558_040 Hb_001009_150 Hb_001009_150 Hb_000318_040--Hb_001009_150 Hb_000318_040--Hb_002995_040 Hb_001103_090 Hb_001103_090 Hb_000318_040--Hb_001103_090 Hb_004355_040 Hb_004355_040 Hb_000318_040--Hb_004355_040 Hb_007137_050 Hb_007137_050 Hb_000318_040--Hb_007137_050 Hb_002045_250 Hb_002045_250 Hb_002874_090--Hb_002045_250 Hb_092000_010 Hb_092000_010 Hb_002874_090--Hb_092000_010 Hb_004544_040 Hb_004544_040 Hb_002874_090--Hb_004544_040 Hb_007062_030 Hb_007062_030 Hb_002874_090--Hb_007062_030 Hb_001552_030 Hb_001552_030 Hb_002874_090--Hb_001552_030 Hb_000017_230 Hb_000017_230 Hb_002874_090--Hb_000017_230 Hb_000630_030 Hb_000630_030 Hb_000413_070--Hb_000630_030 Hb_001349_030 Hb_001349_030 Hb_000413_070--Hb_001349_030 Hb_000413_070--Hb_004355_040 Hb_000413_070--Hb_000588_080 Hb_000413_070--Hb_001059_130 Hb_000580_030 Hb_000580_030 Hb_000413_070--Hb_000580_030 Hb_000284_230 Hb_000284_230 Hb_001059_130--Hb_000284_230 Hb_001059_130--Hb_001194_020 Hb_000358_100 Hb_000358_100 Hb_001059_130--Hb_000358_100 Hb_001059_130--Hb_000020_160 Hb_006355_020 Hb_006355_020 Hb_001059_130--Hb_006355_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.76901 7.24676 4.48808 10.9878 2.13538 6.10446
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.81918 1.10813 1.20918 6.53377 7.25597

CAGE analysis