Hb_003559_010

Information

Type -
Description -
Location Contig3559: 20643-22233
Sequence    

Annotation

kegg
ID rcu:RCOM_0231780
description Peroxidase 27 precursor, putative (EC:1.11.1.7)
nr
ID XP_002527239.1
description Peroxidase 27 precursor, putative [Ricinus communis]
swissprot
ID Q43735
description Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1
trembl
ID B9SMM0
description Peroxidase OS=Ricinus communis GN=RCOM_0231780 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 27-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36805: 20782-21592
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003559_010 0.0 - - Peroxidase 27 precursor, putative [Ricinus communis]
2 Hb_067971_010 0.0621564859 - - polyprotein [Citrus endogenous pararetrovirus]
3 Hb_000758_060 0.1022820866 - - PREDICTED: GDSL esterase/lipase At5g45960 [Jatropha curcas]
4 Hb_000920_340 0.1110131802 - - o-methyltransferase, putative [Ricinus communis]
5 Hb_002474_020 0.1157333288 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104585652 [Nelumbo nucifera]
6 Hb_004291_060 0.1166583288 - - hypothetical protein F775_42457 [Aegilops tauschii]
7 Hb_002764_020 0.1190493359 - - hypothetical protein JCGZ_24084 [Jatropha curcas]
8 Hb_101705_040 0.1208485868 - - cytochrome P450, putative [Ricinus communis]
9 Hb_000043_060 0.1222376731 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 35 [Jatropha curcas]
10 Hb_000155_230 0.1240050325 - - rac gtpase, putative [Ricinus communis]
11 Hb_007718_040 0.1264461669 - - hypothetical protein PRUPE_ppb025054mg [Prunus persica]
12 Hb_140595_030 0.1266354242 - - -
13 Hb_002929_040 0.1275340763 - - zinc finger protein, putative [Ricinus communis]
14 Hb_002445_020 0.1282944613 - - -
15 Hb_001105_150 0.1289403138 - - GERMIN-LIKE protein 10 [Populus trichocarpa]
16 Hb_000152_400 0.1323322121 - - PREDICTED: uncharacterized protein LOC105648582 [Jatropha curcas]
17 Hb_032050_030 0.1323996874 - - C, putative [Ricinus communis]
18 Hb_020332_020 0.1324171205 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
19 Hb_030370_080 0.1338498923 - - hypothetical protein SELMODRAFT_100988 [Selaginella moellendorffii]
20 Hb_002112_030 0.1339894059 - - Alpha-expansin 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_003559_010 Hb_003559_010 Hb_067971_010 Hb_067971_010 Hb_003559_010--Hb_067971_010 Hb_000758_060 Hb_000758_060 Hb_003559_010--Hb_000758_060 Hb_000920_340 Hb_000920_340 Hb_003559_010--Hb_000920_340 Hb_002474_020 Hb_002474_020 Hb_003559_010--Hb_002474_020 Hb_004291_060 Hb_004291_060 Hb_003559_010--Hb_004291_060 Hb_002764_020 Hb_002764_020 Hb_003559_010--Hb_002764_020 Hb_032050_030 Hb_032050_030 Hb_067971_010--Hb_032050_030 Hb_030370_080 Hb_030370_080 Hb_067971_010--Hb_030370_080 Hb_002112_030 Hb_002112_030 Hb_067971_010--Hb_002112_030 Hb_153625_010 Hb_153625_010 Hb_067971_010--Hb_153625_010 Hb_000152_400 Hb_000152_400 Hb_067971_010--Hb_000152_400 Hb_000043_060 Hb_000043_060 Hb_000758_060--Hb_000043_060 Hb_002294_020 Hb_002294_020 Hb_000758_060--Hb_002294_020 Hb_004466_080 Hb_004466_080 Hb_000758_060--Hb_004466_080 Hb_025654_010 Hb_025654_010 Hb_000758_060--Hb_025654_010 Hb_011540_050 Hb_011540_050 Hb_000758_060--Hb_011540_050 Hb_187301_010 Hb_187301_010 Hb_000758_060--Hb_187301_010 Hb_007718_040 Hb_007718_040 Hb_000920_340--Hb_007718_040 Hb_189208_080 Hb_189208_080 Hb_000920_340--Hb_189208_080 Hb_140595_030 Hb_140595_030 Hb_000920_340--Hb_140595_030 Hb_001104_070 Hb_001104_070 Hb_000920_340--Hb_001104_070 Hb_080048_030 Hb_080048_030 Hb_000920_340--Hb_080048_030 Hb_002445_020 Hb_002445_020 Hb_000920_340--Hb_002445_020 Hb_001267_020 Hb_001267_020 Hb_002474_020--Hb_001267_020 Hb_002474_020--Hb_004291_060 Hb_000247_060 Hb_000247_060 Hb_002474_020--Hb_000247_060 Hb_000450_110 Hb_000450_110 Hb_002474_020--Hb_000450_110 Hb_000138_180 Hb_000138_180 Hb_002474_020--Hb_000138_180 Hb_000193_090 Hb_000193_090 Hb_004291_060--Hb_000193_090 Hb_001221_250 Hb_001221_250 Hb_004291_060--Hb_001221_250 Hb_004291_060--Hb_067971_010 Hb_007590_030 Hb_007590_030 Hb_004291_060--Hb_007590_030 Hb_009004_020 Hb_009004_020 Hb_002764_020--Hb_009004_020 Hb_002764_020--Hb_002445_020 Hb_002764_020--Hb_007718_040 Hb_000768_080 Hb_000768_080 Hb_002764_020--Hb_000768_080 Hb_002764_020--Hb_000920_340 Hb_002600_110 Hb_002600_110 Hb_002764_020--Hb_002600_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.36484 0.388762 17.9592 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0294484 0 0.0117826 60.126

CAGE analysis