Hb_002764_020

Information

Type -
Description -
Location Contig2764: 16142-16369
Sequence    

Annotation

kegg
ID pop:POPTR_0005s08070g
description hypothetical protein
nr
ID KDP46875.1
description hypothetical protein JCGZ_24084 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LPQ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24084 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002764_020 0.0 - - hypothetical protein JCGZ_24084 [Jatropha curcas]
2 Hb_009004_020 0.0589903233 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
3 Hb_002445_020 0.0682296096 - - -
4 Hb_007718_040 0.0739145929 - - hypothetical protein PRUPE_ppb025054mg [Prunus persica]
5 Hb_000768_080 0.0851873863 - - Mlo protein [Hevea brasiliensis]
6 Hb_000920_340 0.0857300336 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_002600_110 0.099958842 - - hypothetical protein POPTR_0004s10540g [Populus trichocarpa]
8 Hb_008864_050 0.1048742715 - - protein binding protein, putative [Ricinus communis]
9 Hb_000776_120 0.11450732 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
10 Hb_000758_060 0.1159697311 - - PREDICTED: GDSL esterase/lipase At5g45960 [Jatropha curcas]
11 Hb_001775_010 0.1175694229 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003559_010 0.1190493359 - - Peroxidase 27 precursor, putative [Ricinus communis]
13 Hb_010021_040 0.1195257389 - - PREDICTED: uncharacterized protein LOC105630811 [Jatropha curcas]
14 Hb_048694_010 0.1205257278 - - catalytic, putative [Ricinus communis]
15 Hb_000043_060 0.1243320391 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 35 [Jatropha curcas]
16 Hb_001104_070 0.1286949848 - - hypothetical protein SORBIDRAFT_10g024640 [Sorghum bicolor]
17 Hb_080048_030 0.1333943034 desease resistance Gene Name: NB-ARC Leucine-rich repeat containing protein [Theobroma cacao]
18 Hb_005194_050 0.1342731906 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
19 Hb_189208_080 0.134487862 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 11-like isoform X1 [Jatropha curcas]
20 Hb_001459_020 0.1350855447 - - ankyrin repeat protein [Bruguiera gymnorhiza]

Gene co-expression network

sample Hb_002764_020 Hb_002764_020 Hb_009004_020 Hb_009004_020 Hb_002764_020--Hb_009004_020 Hb_002445_020 Hb_002445_020 Hb_002764_020--Hb_002445_020 Hb_007718_040 Hb_007718_040 Hb_002764_020--Hb_007718_040 Hb_000768_080 Hb_000768_080 Hb_002764_020--Hb_000768_080 Hb_000920_340 Hb_000920_340 Hb_002764_020--Hb_000920_340 Hb_002600_110 Hb_002600_110 Hb_002764_020--Hb_002600_110 Hb_048694_010 Hb_048694_010 Hb_009004_020--Hb_048694_010 Hb_000758_060 Hb_000758_060 Hb_009004_020--Hb_000758_060 Hb_009004_020--Hb_002600_110 Hb_009004_020--Hb_000768_080 Hb_009004_020--Hb_002445_020 Hb_002445_020--Hb_002600_110 Hb_002445_020--Hb_000768_080 Hb_002445_020--Hb_000920_340 Hb_042123_010 Hb_042123_010 Hb_002445_020--Hb_042123_010 Hb_002445_020--Hb_007718_040 Hb_007718_040--Hb_000920_340 Hb_001104_070 Hb_001104_070 Hb_007718_040--Hb_001104_070 Hb_140595_030 Hb_140595_030 Hb_007718_040--Hb_140595_030 Hb_189208_080 Hb_189208_080 Hb_007718_040--Hb_189208_080 Hb_001775_010 Hb_001775_010 Hb_000768_080--Hb_001775_010 Hb_008864_050 Hb_008864_050 Hb_000768_080--Hb_008864_050 Hb_000768_080--Hb_002600_110 Hb_010021_040 Hb_010021_040 Hb_000768_080--Hb_010021_040 Hb_001080_290 Hb_001080_290 Hb_000768_080--Hb_001080_290 Hb_000920_340--Hb_189208_080 Hb_000920_340--Hb_140595_030 Hb_000920_340--Hb_001104_070 Hb_080048_030 Hb_080048_030 Hb_000920_340--Hb_080048_030 Hb_183479_030 Hb_183479_030 Hb_002600_110--Hb_183479_030 Hb_002600_110--Hb_048694_010 Hb_002600_110--Hb_001775_010 Hb_002600_110--Hb_001080_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.606972 0.500558 2.40397 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 12.9162

CAGE analysis