Hb_002950_090

Information

Type -
Description -
Location Contig2950: 116862-118237
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002950_090 0.0 - - -
2 Hb_000975_240 0.1787660045 - - hypothetical protein JCGZ_22006 [Jatropha curcas]
3 Hb_002028_140 0.1974079459 transcription factor TF Family: Tify JAZ11 [Hevea brasiliensis]
4 Hb_000035_250 0.2138777426 - - PREDICTED: uncharacterized protein LOC105637544 [Jatropha curcas]
5 Hb_010407_160 0.2157636708 - - PREDICTED: chromatin modification-related protein MEAF6 isoform X1 [Jatropha curcas]
6 Hb_011053_010 0.2166435398 - - PREDICTED: uncharacterized protein LOC105631146 [Jatropha curcas]
7 Hb_002542_040 0.2184255767 - - hypothetical protein JCGZ_13884 [Jatropha curcas]
8 Hb_002343_040 0.2201202925 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_000866_280 0.223520389 - - PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
10 Hb_000260_800 0.2237728827 - - PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Populus euphratica]
11 Hb_000291_030 0.2308161123 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Eucalyptus grandis]
12 Hb_000003_300 0.2309544007 - - PREDICTED: uncharacterized protein LOC105631182 [Jatropha curcas]
13 Hb_000975_220 0.2313076896 - - Histone H2B [Medicago truncatula]
14 Hb_001671_040 0.2315420919 - - PREDICTED: serine/arginine-rich splicing factor RS31-like isoform X1 [Populus euphratica]
15 Hb_001930_030 0.2323370394 - - PREDICTED: 30S ribosomal protein S10, chloroplastic [Jatropha curcas]
16 Hb_000979_060 0.2323826213 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Gossypium raimondii]
17 Hb_000424_020 0.2333193933 - - Uncharacterized protein TCM_037386 [Theobroma cacao]
18 Hb_005194_020 0.2334960714 - - PREDICTED: UPF0553 protein-like isoform X1 [Jatropha curcas]
19 Hb_006671_020 0.233798607 - - hypothetical protein CISIN_1g0407181mg, partial [Citrus sinensis]
20 Hb_001953_070 0.2339788212 - - PREDICTED: RNA pseudouridine synthase 7 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002950_090 Hb_002950_090 Hb_000975_240 Hb_000975_240 Hb_002950_090--Hb_000975_240 Hb_002028_140 Hb_002028_140 Hb_002950_090--Hb_002028_140 Hb_000035_250 Hb_000035_250 Hb_002950_090--Hb_000035_250 Hb_010407_160 Hb_010407_160 Hb_002950_090--Hb_010407_160 Hb_011053_010 Hb_011053_010 Hb_002950_090--Hb_011053_010 Hb_002542_040 Hb_002542_040 Hb_002950_090--Hb_002542_040 Hb_003077_150 Hb_003077_150 Hb_000975_240--Hb_003077_150 Hb_010080_010 Hb_010080_010 Hb_000975_240--Hb_010080_010 Hb_009771_060 Hb_009771_060 Hb_000975_240--Hb_009771_060 Hb_000975_240--Hb_011053_010 Hb_000413_060 Hb_000413_060 Hb_000975_240--Hb_000413_060 Hb_011386_050 Hb_011386_050 Hb_000975_240--Hb_011386_050 Hb_002028_140--Hb_002542_040 Hb_001953_070 Hb_001953_070 Hb_002028_140--Hb_001953_070 Hb_002016_150 Hb_002016_150 Hb_002028_140--Hb_002016_150 Hb_001998_120 Hb_001998_120 Hb_002028_140--Hb_001998_120 Hb_000010_110 Hb_000010_110 Hb_002028_140--Hb_000010_110 Hb_000367_160 Hb_000367_160 Hb_002028_140--Hb_000367_160 Hb_001671_040 Hb_001671_040 Hb_000035_250--Hb_001671_040 Hb_012340_090 Hb_012340_090 Hb_000035_250--Hb_012340_090 Hb_000035_250--Hb_001953_070 Hb_004128_200 Hb_004128_200 Hb_000035_250--Hb_004128_200 Hb_002343_040 Hb_002343_040 Hb_000035_250--Hb_002343_040 Hb_002284_150 Hb_002284_150 Hb_000035_250--Hb_002284_150 Hb_010407_160--Hb_009771_060 Hb_001930_030 Hb_001930_030 Hb_010407_160--Hb_001930_030 Hb_000003_300 Hb_000003_300 Hb_010407_160--Hb_000003_300 Hb_002194_050 Hb_002194_050 Hb_010407_160--Hb_002194_050 Hb_155025_010 Hb_155025_010 Hb_010407_160--Hb_155025_010 Hb_002265_010 Hb_002265_010 Hb_010407_160--Hb_002265_010 Hb_011053_010--Hb_000413_060 Hb_000390_090 Hb_000390_090 Hb_011053_010--Hb_000390_090 Hb_006061_040 Hb_006061_040 Hb_011053_010--Hb_006061_040 Hb_000163_100 Hb_000163_100 Hb_011053_010--Hb_000163_100 Hb_011053_010--Hb_002343_040 Hb_146255_020 Hb_146255_020 Hb_011053_010--Hb_146255_020 Hb_002542_040--Hb_001953_070 Hb_007533_010 Hb_007533_010 Hb_002542_040--Hb_007533_010 Hb_002163_050 Hb_002163_050 Hb_002542_040--Hb_002163_050 Hb_002542_040--Hb_000010_110 Hb_001623_270 Hb_001623_270 Hb_002542_040--Hb_001623_270 Hb_002542_040--Hb_012340_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.104199 0.147409 0.377306 0 0.091892 0.0278804
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.112413 0.17681 0.0808935 0.0712548 0.089862

CAGE analysis