Hb_002311_430

Information

Type -
Description -
Location Contig2311: 221975-222316
Sequence    

Annotation

kegg
ID rcu:RCOM_0682110
description hypothetical protein
nr
ID KDP27838.1
description hypothetical protein JCGZ_18918 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JYH9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18918 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002311_430 0.0 - - hypothetical protein JCGZ_18918 [Jatropha curcas]
2 Hb_000987_080 0.1384584753 - - light-inducible protein atls1, putative [Ricinus communis]
3 Hb_003031_070 0.1566401997 - - PREDICTED: cysteine-rich repeat secretory protein 55-like [Jatropha curcas]
4 Hb_009787_020 0.15678973 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
5 Hb_077562_010 0.1610258804 - - PREDICTED: WAT1-related protein At5g07050 [Jatropha curcas]
6 Hb_000207_420 0.1717932975 - - hypothetical protein POPTR_0019s11600g [Populus trichocarpa]
7 Hb_006816_540 0.1760370833 - - PREDICTED: bidirectional sugar transporter SWEET16-like [Jatropha curcas]
8 Hb_004089_010 0.1797768606 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
9 Hb_001481_110 0.1807071836 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
10 Hb_004607_180 0.1814102783 - - conserved hypothetical protein [Ricinus communis]
11 Hb_047725_010 0.1819622381 - - ceramidase, putative [Ricinus communis]
12 Hb_007885_120 0.1858995148 - - PREDICTED: BON1-associated protein 2-like [Jatropha curcas]
13 Hb_002393_060 0.1866071842 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
14 Hb_000922_290 0.1875124619 - - PREDICTED: probable boron transporter 2 [Jatropha curcas]
15 Hb_002241_020 0.1894646455 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
16 Hb_024857_010 0.1913034004 - - glutaredoxin 2.1 [Hevea brasiliensis]
17 Hb_002236_020 0.1929960762 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
18 Hb_007007_110 0.1937312218 - - hypothetical protein JCGZ_14479 [Jatropha curcas]
19 Hb_002820_090 0.1957627628 - - PREDICTED: WAT1-related protein At1g21890-like [Jatropha curcas]
20 Hb_081686_030 0.1960348632 - - hypothetical protein MIMGU_mgv11b016770mg [Erythranthe guttata]

Gene co-expression network

sample Hb_002311_430 Hb_002311_430 Hb_000987_080 Hb_000987_080 Hb_002311_430--Hb_000987_080 Hb_003031_070 Hb_003031_070 Hb_002311_430--Hb_003031_070 Hb_009787_020 Hb_009787_020 Hb_002311_430--Hb_009787_020 Hb_077562_010 Hb_077562_010 Hb_002311_430--Hb_077562_010 Hb_000207_420 Hb_000207_420 Hb_002311_430--Hb_000207_420 Hb_006816_540 Hb_006816_540 Hb_002311_430--Hb_006816_540 Hb_000922_290 Hb_000922_290 Hb_000987_080--Hb_000922_290 Hb_000316_080 Hb_000316_080 Hb_000987_080--Hb_000316_080 Hb_005892_010 Hb_005892_010 Hb_000987_080--Hb_005892_010 Hb_002241_020 Hb_002241_020 Hb_000987_080--Hb_002241_020 Hb_013691_040 Hb_013691_040 Hb_000987_080--Hb_013691_040 Hb_002110_210 Hb_002110_210 Hb_000987_080--Hb_002110_210 Hb_047725_010 Hb_047725_010 Hb_003031_070--Hb_047725_010 Hb_007007_110 Hb_007007_110 Hb_003031_070--Hb_007007_110 Hb_003031_070--Hb_009787_020 Hb_007885_120 Hb_007885_120 Hb_003031_070--Hb_007885_120 Hb_004659_110 Hb_004659_110 Hb_003031_070--Hb_004659_110 Hb_002025_120 Hb_002025_120 Hb_003031_070--Hb_002025_120 Hb_009787_020--Hb_004659_110 Hb_009787_020--Hb_007885_120 Hb_009787_020--Hb_047725_010 Hb_000702_040 Hb_000702_040 Hb_009787_020--Hb_000702_040 Hb_009787_020--Hb_007007_110 Hb_000318_320 Hb_000318_320 Hb_077562_010--Hb_000318_320 Hb_004607_180 Hb_004607_180 Hb_077562_010--Hb_004607_180 Hb_000840_230 Hb_000840_230 Hb_077562_010--Hb_000840_230 Hb_002639_090 Hb_002639_090 Hb_077562_010--Hb_002639_090 Hb_001998_130 Hb_001998_130 Hb_077562_010--Hb_001998_130 Hb_077562_010--Hb_047725_010 Hb_001481_110 Hb_001481_110 Hb_000207_420--Hb_001481_110 Hb_001610_050 Hb_001610_050 Hb_000207_420--Hb_001610_050 Hb_000805_330 Hb_000805_330 Hb_000207_420--Hb_000805_330 Hb_000207_420--Hb_006816_540 Hb_000431_030 Hb_000431_030 Hb_000207_420--Hb_000431_030 Hb_006816_540--Hb_007885_120 Hb_161954_010 Hb_161954_010 Hb_006816_540--Hb_161954_010 Hb_006890_050 Hb_006890_050 Hb_006816_540--Hb_006890_050 Hb_004767_010 Hb_004767_010 Hb_006816_540--Hb_004767_010 Hb_002393_060 Hb_002393_060 Hb_006816_540--Hb_002393_060 Hb_001227_010 Hb_001227_010 Hb_006816_540--Hb_001227_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.19126 0 2.45708 0.109051 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.386473 0.357048

CAGE analysis