Hb_002301_390

Information

Type -
Description -
Location Contig2301: 354144-354988
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002301_390 0.0 - - -
2 Hb_000025_430 0.2239181619 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
3 Hb_000120_390 0.2248369415 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
4 Hb_046994_010 0.2294255377 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
5 Hb_000417_320 0.2427500464 - - hypothetical protein CICLE_v10000333mg [Citrus clementina]
6 Hb_094437_060 0.2451164512 - - PREDICTED: cytochrome B5 isoform D-like [Jatropha curcas]
7 Hb_000805_320 0.2466699268 - - PREDICTED: putative hydrolase C777.06c [Jatropha curcas]
8 Hb_001258_060 0.2470814881 - - PREDICTED: phosphoenolpyruvate carboxykinase [ATP] [Jatropha curcas]
9 Hb_001565_110 0.2522533241 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
10 Hb_000414_110 0.2560412029 - - PREDICTED: MATE efflux family protein 5 isoform X1 [Populus euphratica]
11 Hb_000318_200 0.2565328783 - - PREDICTED: hyoscyamine 6-dioxygenase-like [Jatropha curcas]
12 Hb_004242_190 0.261106304 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
13 Hb_003073_180 0.2642826261 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
14 Hb_000260_290 0.2666354249 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
15 Hb_080147_100 0.2674875986 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN [Jatropha curcas]
16 Hb_138585_110 0.2749110358 - - -
17 Hb_014894_010 0.2774573038 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
18 Hb_008864_090 0.2803831982 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
19 Hb_007763_030 0.2822201655 - - PREDICTED: uncharacterized protein LOC105638154 [Jatropha curcas]
20 Hb_001507_100 0.2836319918 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_002301_390 Hb_002301_390 Hb_000025_430 Hb_000025_430 Hb_002301_390--Hb_000025_430 Hb_000120_390 Hb_000120_390 Hb_002301_390--Hb_000120_390 Hb_046994_010 Hb_046994_010 Hb_002301_390--Hb_046994_010 Hb_000417_320 Hb_000417_320 Hb_002301_390--Hb_000417_320 Hb_094437_060 Hb_094437_060 Hb_002301_390--Hb_094437_060 Hb_000805_320 Hb_000805_320 Hb_002301_390--Hb_000805_320 Hb_001565_110 Hb_001565_110 Hb_000025_430--Hb_001565_110 Hb_078001_010 Hb_078001_010 Hb_000025_430--Hb_078001_010 Hb_000005_250 Hb_000005_250 Hb_000025_430--Hb_000005_250 Hb_000025_430--Hb_094437_060 Hb_004800_170 Hb_004800_170 Hb_000025_430--Hb_004800_170 Hb_000165_210 Hb_000165_210 Hb_000120_390--Hb_000165_210 Hb_000318_200 Hb_000318_200 Hb_000120_390--Hb_000318_200 Hb_000120_390--Hb_000417_320 Hb_000414_110 Hb_000414_110 Hb_000120_390--Hb_000414_110 Hb_181110_010 Hb_181110_010 Hb_000120_390--Hb_181110_010 Hb_003226_120 Hb_003226_120 Hb_000120_390--Hb_003226_120 Hb_046994_010--Hb_004800_170 Hb_002233_040 Hb_002233_040 Hb_046994_010--Hb_002233_040 Hb_004143_120 Hb_004143_120 Hb_046994_010--Hb_004143_120 Hb_005389_190 Hb_005389_190 Hb_046994_010--Hb_005389_190 Hb_144004_010 Hb_144004_010 Hb_046994_010--Hb_144004_010 Hb_000417_320--Hb_000414_110 Hb_119494_010 Hb_119494_010 Hb_000417_320--Hb_119494_010 Hb_014894_010 Hb_014894_010 Hb_000417_320--Hb_014894_010 Hb_000417_320--Hb_000318_200 Hb_039145_010 Hb_039145_010 Hb_000417_320--Hb_039145_010 Hb_028811_010 Hb_028811_010 Hb_000417_320--Hb_028811_010 Hb_094437_060--Hb_000805_320 Hb_138710_010 Hb_138710_010 Hb_094437_060--Hb_138710_010 Hb_001355_130 Hb_001355_130 Hb_094437_060--Hb_001355_130 Hb_005873_010 Hb_005873_010 Hb_094437_060--Hb_005873_010 Hb_007432_020 Hb_007432_020 Hb_094437_060--Hb_007432_020 Hb_105602_010 Hb_105602_010 Hb_094437_060--Hb_105602_010 Hb_004242_190 Hb_004242_190 Hb_000805_320--Hb_004242_190 Hb_000805_320--Hb_105602_010 Hb_001258_060 Hb_001258_060 Hb_000805_320--Hb_001258_060 Hb_003073_180 Hb_003073_180 Hb_000805_320--Hb_003073_180 Hb_000805_320--Hb_014894_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.387325 1.4561 0.428137 0 1.03018 0.310307
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.93496 0.813626 1.33161 6.59528 0.244191

CAGE analysis