Hb_002301_300

Information

Type -
Description -
Location Contig2301: 297382-301434
Sequence    

Annotation

kegg
ID pop:POPTR_0006s08500g
description hypothetical protein
nr
ID XP_012091632.1
description PREDICTED: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X1 [Jatropha curcas]
swissprot
ID Q5BKT4
description Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase OS=Homo sapiens GN=ALG10 PE=2 SV=1
trembl
ID A0A067JN94
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21460 PE=4 SV=1
Gene Ontology
ID GO:0005789
description dol-p-glc:glc man c -pp-dol alpha- -glucosyltransferase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24171: 297383-301407
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002301_300 0.0 - - PREDICTED: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X1 [Jatropha curcas]
2 Hb_002092_130 0.0642302668 - - PREDICTED: protein CASP-like [Oryza brachyantha]
3 Hb_003436_020 0.0700489073 transcription factor TF Family: Orphans PREDICTED: uncharacterized protein LOC105636276 isoform X2 [Jatropha curcas]
4 Hb_010294_010 0.0704991026 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
5 Hb_001009_320 0.0725716631 - - PREDICTED: uncharacterized protein LOC105640250 [Jatropha curcas]
6 Hb_003375_070 0.0800361705 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
7 Hb_004267_040 0.0827218124 - - PREDICTED: transcriptional adapter ADA2a [Jatropha curcas]
8 Hb_000522_170 0.0832800626 - - PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1 [Jatropha curcas]
9 Hb_005618_050 0.0833907623 - - PREDICTED: charged multivesicular body protein 7 isoform X1 [Jatropha curcas]
10 Hb_000120_280 0.0839070686 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]
11 Hb_000006_010 0.0842989953 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000139_260 0.0853759363 - - PREDICTED: protein phosphatase 2C 70 [Jatropha curcas]
13 Hb_002073_190 0.0861433438 - - PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
14 Hb_003645_060 0.0872539817 - - PREDICTED: monodehydroascorbate reductase, chloroplastic [Jatropha curcas]
15 Hb_001089_070 0.0873842777 - - PREDICTED: conserved oligomeric Golgi complex subunit 3 [Jatropha curcas]
16 Hb_000347_430 0.087437329 - - PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-A [Jatropha curcas]
17 Hb_002785_050 0.0887042932 - - PREDICTED: adenylosuccinate lyase-like [Jatropha curcas]
18 Hb_034432_030 0.089303475 - - PREDICTED: probable glycosyltransferase At5g20260 isoform X1 [Jatropha curcas]
19 Hb_015807_050 0.089443529 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
20 Hb_000035_470 0.0901594232 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_002301_300 Hb_002301_300 Hb_002092_130 Hb_002092_130 Hb_002301_300--Hb_002092_130 Hb_003436_020 Hb_003436_020 Hb_002301_300--Hb_003436_020 Hb_010294_010 Hb_010294_010 Hb_002301_300--Hb_010294_010 Hb_001009_320 Hb_001009_320 Hb_002301_300--Hb_001009_320 Hb_003375_070 Hb_003375_070 Hb_002301_300--Hb_003375_070 Hb_004267_040 Hb_004267_040 Hb_002301_300--Hb_004267_040 Hb_001062_010 Hb_001062_010 Hb_002092_130--Hb_001062_010 Hb_000603_030 Hb_000603_030 Hb_002092_130--Hb_000603_030 Hb_002311_290 Hb_002311_290 Hb_002092_130--Hb_002311_290 Hb_002631_170 Hb_002631_170 Hb_002092_130--Hb_002631_170 Hb_002092_130--Hb_004267_040 Hb_000610_040 Hb_000610_040 Hb_003436_020--Hb_000610_040 Hb_003645_060 Hb_003645_060 Hb_003436_020--Hb_003645_060 Hb_003436_020--Hb_004267_040 Hb_000487_180 Hb_000487_180 Hb_003436_020--Hb_000487_180 Hb_000563_130 Hb_000563_130 Hb_003436_020--Hb_000563_130 Hb_000667_030 Hb_000667_030 Hb_010294_010--Hb_000667_030 Hb_002026_150 Hb_002026_150 Hb_010294_010--Hb_002026_150 Hb_011228_010 Hb_011228_010 Hb_010294_010--Hb_011228_010 Hb_000960_040 Hb_000960_040 Hb_010294_010--Hb_000960_040 Hb_012330_010 Hb_012330_010 Hb_010294_010--Hb_012330_010 Hb_000006_010 Hb_000006_010 Hb_001009_320--Hb_000006_010 Hb_000477_050 Hb_000477_050 Hb_001009_320--Hb_000477_050 Hb_000522_170 Hb_000522_170 Hb_001009_320--Hb_000522_170 Hb_000120_280 Hb_000120_280 Hb_001009_320--Hb_000120_280 Hb_015807_050 Hb_015807_050 Hb_001009_320--Hb_015807_050 Hb_000313_220 Hb_000313_220 Hb_001009_320--Hb_000313_220 Hb_001135_220 Hb_001135_220 Hb_003375_070--Hb_001135_220 Hb_000139_370 Hb_000139_370 Hb_003375_070--Hb_000139_370 Hb_011930_160 Hb_011930_160 Hb_003375_070--Hb_011930_160 Hb_002273_120 Hb_002273_120 Hb_003375_070--Hb_002273_120 Hb_003025_110 Hb_003025_110 Hb_003375_070--Hb_003025_110 Hb_007632_240 Hb_007632_240 Hb_003375_070--Hb_007632_240 Hb_000011_100 Hb_000011_100 Hb_004267_040--Hb_000011_100 Hb_004267_040--Hb_000120_280 Hb_004267_040--Hb_000563_130 Hb_005588_090 Hb_005588_090 Hb_004267_040--Hb_005588_090 Hb_000398_080 Hb_000398_080 Hb_004267_040--Hb_000398_080 Hb_004267_040--Hb_000603_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.32954 4.36349 7.14512 7.91703 11.0321 6.61915
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.34468 4.74729 4.77862 8.34668 8.16491

CAGE analysis