Hb_002043_100

Information

Type -
Description -
Location Contig2043: 128837-134757
Sequence    

Annotation

kegg
ID rcu:RCOM_1485750
description hypothetical protein
nr
ID XP_002515888.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q0JJZ6
description Anoctamin-like protein Os01g0706700 OS=Oryza sativa subsp. japonica GN=Os01g0706700 PE=2 SV=1
trembl
ID B9RQ69
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1485750 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002043_100 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001907_080 0.1221089782 - - PREDICTED: uncharacterized protein LOC105628749 [Jatropha curcas]
3 Hb_001421_040 0.1479536798 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2 [Jatropha curcas]
4 Hb_069512_010 0.1535389374 - - -
5 Hb_001377_060 0.1651096552 - - PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial [Jatropha curcas]
6 Hb_016687_010 0.1657912707 - - PREDICTED: uncharacterized protein LOC105637401 [Jatropha curcas]
7 Hb_005488_190 0.1706871236 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
8 Hb_001244_050 0.1750684861 - - PREDICTED: uncharacterized protein LOC105643334 [Jatropha curcas]
9 Hb_126933_020 0.1797558205 - - PREDICTED: uncharacterized protein LOC105638525 [Jatropha curcas]
10 Hb_046157_010 0.1819869851 - - PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Jatropha curcas]
11 Hb_000866_020 0.1824750744 - - hypothetical protein B456_004G042000 [Gossypium raimondii]
12 Hb_005976_090 0.1828976635 - - DNA binding protein, putative [Ricinus communis]
13 Hb_001584_050 0.1830365478 - - PREDICTED: NHL repeat-containing protein 2 isoform X1 [Jatropha curcas]
14 Hb_001377_210 0.1836079838 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
15 Hb_000254_120 0.1842994617 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000035_340 0.1843248973 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004048_030 0.1847700522 - - hypothetical protein B456_009G371200, partial [Gossypium raimondii]
18 Hb_003602_030 0.1859330133 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Jatropha curcas]
19 Hb_000608_360 0.1866137887 - - calreticulin, putative [Ricinus communis]
20 Hb_006277_080 0.1870388735 - - PREDICTED: uncharacterized protein LOC105649701 [Jatropha curcas]

Gene co-expression network

sample Hb_002043_100 Hb_002043_100 Hb_001907_080 Hb_001907_080 Hb_002043_100--Hb_001907_080 Hb_001421_040 Hb_001421_040 Hb_002043_100--Hb_001421_040 Hb_069512_010 Hb_069512_010 Hb_002043_100--Hb_069512_010 Hb_001377_060 Hb_001377_060 Hb_002043_100--Hb_001377_060 Hb_016687_010 Hb_016687_010 Hb_002043_100--Hb_016687_010 Hb_005488_190 Hb_005488_190 Hb_002043_100--Hb_005488_190 Hb_000193_220 Hb_000193_220 Hb_001907_080--Hb_000193_220 Hb_009692_040 Hb_009692_040 Hb_001907_080--Hb_009692_040 Hb_010721_020 Hb_010721_020 Hb_001907_080--Hb_010721_020 Hb_002960_040 Hb_002960_040 Hb_001907_080--Hb_002960_040 Hb_000118_090 Hb_000118_090 Hb_001907_080--Hb_000118_090 Hb_001421_040--Hb_001377_060 Hb_001728_110 Hb_001728_110 Hb_001421_040--Hb_001728_110 Hb_001421_040--Hb_001907_080 Hb_000007_030 Hb_000007_030 Hb_001421_040--Hb_000007_030 Hb_002835_090 Hb_002835_090 Hb_001421_040--Hb_002835_090 Hb_046157_010 Hb_046157_010 Hb_069512_010--Hb_046157_010 Hb_126933_020 Hb_126933_020 Hb_069512_010--Hb_126933_020 Hb_150651_020 Hb_150651_020 Hb_069512_010--Hb_150651_020 Hb_002498_300 Hb_002498_300 Hb_069512_010--Hb_002498_300 Hb_004048_030 Hb_004048_030 Hb_069512_010--Hb_004048_030 Hb_001377_060--Hb_002835_090 Hb_000254_120 Hb_000254_120 Hb_001377_060--Hb_000254_120 Hb_004712_200 Hb_004712_200 Hb_001377_060--Hb_004712_200 Hb_001377_060--Hb_000193_220 Hb_001377_060--Hb_010721_020 Hb_001584_050 Hb_001584_050 Hb_001377_060--Hb_001584_050 Hb_000697_020 Hb_000697_020 Hb_016687_010--Hb_000697_020 Hb_003119_130 Hb_003119_130 Hb_016687_010--Hb_003119_130 Hb_003141_060 Hb_003141_060 Hb_016687_010--Hb_003141_060 Hb_008878_020 Hb_008878_020 Hb_016687_010--Hb_008878_020 Hb_001172_150 Hb_001172_150 Hb_016687_010--Hb_001172_150 Hb_061126_010 Hb_061126_010 Hb_016687_010--Hb_061126_010 Hb_007803_040 Hb_007803_040 Hb_005488_190--Hb_007803_040 Hb_002811_250 Hb_002811_250 Hb_005488_190--Hb_002811_250 Hb_006681_020 Hb_006681_020 Hb_005488_190--Hb_006681_020 Hb_009393_130 Hb_009393_130 Hb_005488_190--Hb_009393_130 Hb_002495_090 Hb_002495_090 Hb_005488_190--Hb_002495_090 Hb_000062_480 Hb_000062_480 Hb_005488_190--Hb_000062_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0235477 0.0347135 0.223525 0.0688965 0.0105252 0.0397114
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0598654 0.39669

CAGE analysis