Hb_002042_060

Information

Type -
Description -
Location Contig2042: 64914-76668
Sequence    

Annotation

kegg
ID rcu:RCOM_1431380
description hypothetical protein
nr
ID XP_002512368.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q84MC0
description Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1
trembl
ID B9RF49
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431380 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002042_060 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_031939_020 0.2573359977 - - -
3 Hb_005588_130 0.2650181503 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004730_010 0.2687312104 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
5 Hb_000068_040 0.2697377452 - - Inter-alpha-trypsin inhibitor heavy chain H3 precursor, putative [Ricinus communis]
6 Hb_034953_010 0.2765086854 - - hypothetical protein JCGZ_00031 [Jatropha curcas]
7 Hb_009403_010 0.2820109338 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
8 Hb_000116_350 0.2836462755 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
9 Hb_000930_020 0.2843876732 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
10 Hb_000256_220 0.2868941141 - - PREDICTED: flotillin-like protein 4 [Jatropha curcas]
11 Hb_000345_110 0.2876649154 - - PREDICTED: uncharacterized protein LOC105647507 [Jatropha curcas]
12 Hb_100526_020 0.2895036978 - - hypothetical protein POPTR_0003s09340g [Populus trichocarpa]
13 Hb_000243_150 0.2925605209 - - ATP binding protein, putative [Ricinus communis]
14 Hb_000974_030 0.2930382035 - - PREDICTED: uncharacterized protein LOC105128463 isoform X1 [Populus euphratica]
15 Hb_129230_010 0.2934342286 - - PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 1-like [Nicotiana sylvestris]
16 Hb_006501_140 0.2961976796 - - PREDICTED: MATE efflux family protein 9-like [Jatropha curcas]
17 Hb_105814_020 0.2978524752 - - berberine bridge enzyme [Hevea brasiliensis]
18 Hb_000000_430 0.2989284793 - - hypothetical protein POPTR_0014s04130g [Populus trichocarpa]
19 Hb_000181_390 0.2990786877 - - unknown [Lotus japonicus]
20 Hb_132259_010 0.3038673737 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]

Gene co-expression network

sample Hb_002042_060 Hb_002042_060 Hb_031939_020 Hb_031939_020 Hb_002042_060--Hb_031939_020 Hb_005588_130 Hb_005588_130 Hb_002042_060--Hb_005588_130 Hb_004730_010 Hb_004730_010 Hb_002042_060--Hb_004730_010 Hb_000068_040 Hb_000068_040 Hb_002042_060--Hb_000068_040 Hb_034953_010 Hb_034953_010 Hb_002042_060--Hb_034953_010 Hb_009403_010 Hb_009403_010 Hb_002042_060--Hb_009403_010 Hb_011288_010 Hb_011288_010 Hb_031939_020--Hb_011288_010 Hb_000000_430 Hb_000000_430 Hb_031939_020--Hb_000000_430 Hb_027204_010 Hb_027204_010 Hb_031939_020--Hb_027204_010 Hb_021254_010 Hb_021254_010 Hb_031939_020--Hb_021254_010 Hb_000392_510 Hb_000392_510 Hb_031939_020--Hb_000392_510 Hb_000172_070 Hb_000172_070 Hb_005588_130--Hb_000172_070 Hb_005588_130--Hb_004730_010 Hb_003175_090 Hb_003175_090 Hb_005588_130--Hb_003175_090 Hb_000342_120 Hb_000342_120 Hb_005588_130--Hb_000342_120 Hb_020301_010 Hb_020301_010 Hb_005588_130--Hb_020301_010 Hb_001699_030 Hb_001699_030 Hb_005588_130--Hb_001699_030 Hb_105814_020 Hb_105814_020 Hb_004730_010--Hb_105814_020 Hb_000041_160 Hb_000041_160 Hb_004730_010--Hb_000041_160 Hb_000813_090 Hb_000813_090 Hb_004730_010--Hb_000813_090 Hb_000015_230 Hb_000015_230 Hb_004730_010--Hb_000015_230 Hb_123078_010 Hb_123078_010 Hb_004730_010--Hb_123078_010 Hb_027474_010 Hb_027474_010 Hb_004730_010--Hb_027474_010 Hb_004450_030 Hb_004450_030 Hb_000068_040--Hb_004450_030 Hb_003090_170 Hb_003090_170 Hb_000068_040--Hb_003090_170 Hb_000258_230 Hb_000258_230 Hb_000068_040--Hb_000258_230 Hb_005790_010 Hb_005790_010 Hb_000068_040--Hb_005790_010 Hb_186312_010 Hb_186312_010 Hb_000068_040--Hb_186312_010 Hb_003209_090 Hb_003209_090 Hb_000068_040--Hb_003209_090 Hb_034953_010--Hb_000342_120 Hb_034953_010--Hb_005588_130 Hb_034953_010--Hb_004730_010 Hb_002004_010 Hb_002004_010 Hb_034953_010--Hb_002004_010 Hb_034953_010--Hb_001699_030 Hb_013691_060 Hb_013691_060 Hb_034953_010--Hb_013691_060 Hb_026415_010 Hb_026415_010 Hb_009403_010--Hb_026415_010 Hb_004879_030 Hb_004879_030 Hb_009403_010--Hb_004879_030 Hb_009403_010--Hb_000813_090 Hb_000974_030 Hb_000974_030 Hb_009403_010--Hb_000974_030 Hb_000325_070 Hb_000325_070 Hb_009403_010--Hb_000325_070 Hb_009403_010--Hb_105814_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.104325 0.0063317 0.0551008 0.0171033 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0193949 0 0 0 0.0647466

CAGE analysis