Hb_000000_430

Information

Type -
Description -
Location Contig0: 672109-674152
Sequence    

Annotation

kegg
ID pop:POPTR_0014s04130g
description hypothetical protein
nr
ID XP_006375073.1
description hypothetical protein POPTR_0014s04130g [Populus trichocarpa]
swissprot
ID Q40287
description Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta GN=GT5 PE=2 SV=1
trembl
ID B9MVE1
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04130g PE=4 SV=1
Gene Ontology
ID GO:0016758
description hydroquinone glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000000_430 0.0 - - hypothetical protein POPTR_0014s04130g [Populus trichocarpa]
2 Hb_000230_550 0.2171666893 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
3 Hb_000805_220 0.2238756638 - - polyprotein [Citrus endogenous pararetrovirus]
4 Hb_009492_020 0.2259624798 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
5 Hb_003589_100 0.2266046273 - - hypothetical protein JCGZ_03338 [Jatropha curcas]
6 Hb_000984_110 0.2310515996 - - hypothetical protein JCGZ_15953 [Jatropha curcas]
7 Hb_001295_050 0.2427532559 - - PREDICTED: uncharacterized protein LOC101503108 isoform X1 [Cicer arietinum]
8 Hb_020301_010 0.2475722513 - - cytochrome P450, putative [Ricinus communis]
9 Hb_005588_130 0.248593489 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003145_030 0.2505431468 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005048_090 0.2515171673 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
12 Hb_028707_100 0.2569839105 - - hypothetical protein RCOM_1687010 [Ricinus communis]
13 Hb_031939_020 0.2605777215 - - -
14 Hb_006501_140 0.2618421 - - PREDICTED: MATE efflux family protein 9-like [Jatropha curcas]
15 Hb_111985_090 0.262304668 - - hypothetical protein RCOM_1595950 [Ricinus communis]
16 Hb_000930_020 0.2642114078 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
17 Hb_000974_030 0.2669853516 - - PREDICTED: uncharacterized protein LOC105128463 isoform X1 [Populus euphratica]
18 Hb_001907_050 0.2692212839 - - Receptor like protein 6, putative [Theobroma cacao]
19 Hb_003175_090 0.2709787146 - - hypothetical protein POPTR_0011s01120g [Populus trichocarpa]
20 Hb_000256_220 0.2720117777 - - PREDICTED: flotillin-like protein 4 [Jatropha curcas]

Gene co-expression network

sample Hb_000000_430 Hb_000000_430 Hb_000230_550 Hb_000230_550 Hb_000000_430--Hb_000230_550 Hb_000805_220 Hb_000805_220 Hb_000000_430--Hb_000805_220 Hb_009492_020 Hb_009492_020 Hb_000000_430--Hb_009492_020 Hb_003589_100 Hb_003589_100 Hb_000000_430--Hb_003589_100 Hb_000984_110 Hb_000984_110 Hb_000000_430--Hb_000984_110 Hb_001295_050 Hb_001295_050 Hb_000000_430--Hb_001295_050 Hb_005048_090 Hb_005048_090 Hb_000230_550--Hb_005048_090 Hb_002170_010 Hb_002170_010 Hb_000230_550--Hb_002170_010 Hb_000172_070 Hb_000172_070 Hb_000230_550--Hb_000172_070 Hb_010267_030 Hb_010267_030 Hb_000230_550--Hb_010267_030 Hb_000230_550--Hb_000984_110 Hb_003145_030 Hb_003145_030 Hb_000230_550--Hb_003145_030 Hb_006501_140 Hb_006501_140 Hb_000805_220--Hb_006501_140 Hb_000805_220--Hb_009492_020 Hb_000930_020 Hb_000930_020 Hb_000805_220--Hb_000930_020 Hb_002060_070 Hb_002060_070 Hb_000805_220--Hb_002060_070 Hb_100526_020 Hb_100526_020 Hb_000805_220--Hb_100526_020 Hb_000096_050 Hb_000096_050 Hb_000805_220--Hb_000096_050 Hb_009492_020--Hb_003589_100 Hb_002837_080 Hb_002837_080 Hb_009492_020--Hb_002837_080 Hb_009492_020--Hb_002060_070 Hb_156850_050 Hb_156850_050 Hb_009492_020--Hb_156850_050 Hb_009492_020--Hb_000930_020 Hb_003589_100--Hb_156850_050 Hb_003589_100--Hb_002837_080 Hb_003589_100--Hb_000805_220 Hb_061783_010 Hb_061783_010 Hb_003589_100--Hb_061783_010 Hb_000953_110 Hb_000953_110 Hb_003589_100--Hb_000953_110 Hb_000984_110--Hb_005048_090 Hb_000984_110--Hb_061783_010 Hb_000984_110--Hb_001295_050 Hb_000984_110--Hb_000172_070 Hb_004102_200 Hb_004102_200 Hb_000984_110--Hb_004102_200 Hb_001295_050--Hb_005048_090 Hb_020301_010 Hb_020301_010 Hb_001295_050--Hb_020301_010 Hb_001295_050--Hb_003145_030 Hb_001295_050--Hb_010267_030 Hb_001295_050--Hb_000172_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.203257 0 0.262503 0.044667 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0874875

CAGE analysis