Hb_002026_170

Information

Type -
Description -
Location Contig2026: 151741-162213
Sequence    

Annotation

kegg
ID rcu:RCOM_1686850
description kinesin heavy chain, putative
nr
ID XP_002509807.1
description kinesin heavy chain, putative [Ricinus communis]
swissprot
ID Q8W1Y3
description Kinesin KP1 OS=Arabidopsis thaliana GN=KP1 PE=1 SV=2
trembl
ID B9RCC3
description Kinesin-like protein OS=Ricinus communis GN=RCOM_1686850 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin motor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20645: 152297-158250 , PASA_asmbl_20646: 158307-162131
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002026_170 0.0 - - kinesin heavy chain, putative [Ricinus communis]
2 Hb_000540_050 0.1181902392 - - PREDICTED: 125 kDa kinesin-related protein-like [Jatropha curcas]
3 Hb_000019_150 0.1319518909 - - PREDICTED: uncharacterized protein LOC105630208 [Jatropha curcas]
4 Hb_001472_060 0.1334069731 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Jatropha curcas]
5 Hb_000808_050 0.134331879 - - exonuclease, putative [Ricinus communis]
6 Hb_001511_050 0.1355797181 - - PREDICTED: probable inactive serine/threonine-protein kinase bub1 isoform X1 [Jatropha curcas]
7 Hb_002498_140 0.1404509867 - - PREDICTED: peroxisomal membrane protein PMP22-like isoform X1 [Solanum lycopersicum]
8 Hb_000088_190 0.1494516696 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000072_090 0.1520005652 - - PREDICTED: SEC14 cytosolic factor [Jatropha curcas]
10 Hb_044662_060 0.1533935135 - - PREDICTED: long chain acyl-CoA synthetase 9, chloroplastic [Jatropha curcas]
11 Hb_000025_030 0.1560818999 - - transcription factor, putative [Ricinus communis]
12 Hb_021409_180 0.1579495504 - - PREDICTED: glutamine-dependent NAD(+) synthetase [Jatropha curcas]
13 Hb_006816_090 0.1585536368 - - PREDICTED: uncharacterized protein LOC105647425 isoform X2 [Jatropha curcas]
14 Hb_000046_040 0.1590785531 - - conserved hypothetical protein [Ricinus communis]
15 Hb_012725_070 0.1622464116 - - PREDICTED: uncharacterized protein LOC105636534 isoform X1 [Jatropha curcas]
16 Hb_000062_370 0.1626377818 - - beta-ketoacyl-ACP reductase [Vernicia fordii]
17 Hb_000056_040 0.1639963807 - - PREDICTED: protein IQ-DOMAIN 31 [Jatropha curcas]
18 Hb_137222_020 0.1642182746 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
19 Hb_000136_110 0.1650632631 - - hypothetical protein B456_011G031000, partial [Gossypium raimondii]
20 Hb_001975_090 0.1673327318 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]

Gene co-expression network

sample Hb_002026_170 Hb_002026_170 Hb_000540_050 Hb_000540_050 Hb_002026_170--Hb_000540_050 Hb_000019_150 Hb_000019_150 Hb_002026_170--Hb_000019_150 Hb_001472_060 Hb_001472_060 Hb_002026_170--Hb_001472_060 Hb_000808_050 Hb_000808_050 Hb_002026_170--Hb_000808_050 Hb_001511_050 Hb_001511_050 Hb_002026_170--Hb_001511_050 Hb_002498_140 Hb_002498_140 Hb_002026_170--Hb_002498_140 Hb_002284_310 Hb_002284_310 Hb_000540_050--Hb_002284_310 Hb_114310_110 Hb_114310_110 Hb_000540_050--Hb_114310_110 Hb_004223_190 Hb_004223_190 Hb_000540_050--Hb_004223_190 Hb_000032_440 Hb_000032_440 Hb_000540_050--Hb_000032_440 Hb_000103_530 Hb_000103_530 Hb_000540_050--Hb_000103_530 Hb_000025_030 Hb_000025_030 Hb_000019_150--Hb_000025_030 Hb_000019_150--Hb_001472_060 Hb_001143_190 Hb_001143_190 Hb_000019_150--Hb_001143_190 Hb_000019_150--Hb_000808_050 Hb_004007_220 Hb_004007_220 Hb_000019_150--Hb_004007_220 Hb_010931_070 Hb_010931_070 Hb_000019_150--Hb_010931_070 Hb_003531_080 Hb_003531_080 Hb_001472_060--Hb_003531_080 Hb_004097_130 Hb_004097_130 Hb_001472_060--Hb_004097_130 Hb_021409_180 Hb_021409_180 Hb_001472_060--Hb_021409_180 Hb_001472_060--Hb_000808_050 Hb_001205_120 Hb_001205_120 Hb_001472_060--Hb_001205_120 Hb_000141_250 Hb_000141_250 Hb_000808_050--Hb_000141_250 Hb_002542_020 Hb_002542_020 Hb_000808_050--Hb_002542_020 Hb_008511_130 Hb_008511_130 Hb_000808_050--Hb_008511_130 Hb_000599_180 Hb_000599_180 Hb_000808_050--Hb_000599_180 Hb_006817_010 Hb_006817_010 Hb_000808_050--Hb_006817_010 Hb_001348_170 Hb_001348_170 Hb_001511_050--Hb_001348_170 Hb_002028_150 Hb_002028_150 Hb_001511_050--Hb_002028_150 Hb_000088_190 Hb_000088_190 Hb_001511_050--Hb_000088_190 Hb_004837_270 Hb_004837_270 Hb_001511_050--Hb_004837_270 Hb_001511_050--Hb_001205_120 Hb_000136_110 Hb_000136_110 Hb_002498_140--Hb_000136_110 Hb_002498_140--Hb_010931_070 Hb_002498_140--Hb_000088_190 Hb_001604_120 Hb_001604_120 Hb_002498_140--Hb_001604_120 Hb_000046_040 Hb_000046_040 Hb_002498_140--Hb_000046_040 Hb_044662_060 Hb_044662_060 Hb_002498_140--Hb_044662_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.21593 1.7174 15.54 7.10903 7.95016 6.4897
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.69936 2.6259 14.6156 4.1654 7.58703

CAGE analysis