Hb_006817_010

Information

Type -
Description -
Location Contig6817: 6191-17043
Sequence    

Annotation

kegg
ID tcc:TCM_006543
description ACT-like protein tyrosine kinase family protein isoform 1
nr
ID XP_012085924.1
description PREDICTED: serine/threonine-protein kinase CTR1 isoform X1 [Jatropha curcas]
swissprot
ID Q2MHE4
description Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1
trembl
ID A0A067JQS7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22286 PE=4 SV=1
Gene Ontology
ID GO:0005829
description act-like protein tyrosine kinase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53865: 6199-16929
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006817_010 0.0 - - PREDICTED: serine/threonine-protein kinase CTR1 isoform X1 [Jatropha curcas]
2 Hb_000866_010 0.0653645003 - - conserved hypothetical protein [Ricinus communis]
3 Hb_012725_070 0.0790200308 - - PREDICTED: uncharacterized protein LOC105636534 isoform X1 [Jatropha curcas]
4 Hb_000808_050 0.0845857974 - - exonuclease, putative [Ricinus communis]
5 Hb_000390_170 0.0877840919 - - PREDICTED: V-type proton ATPase subunit H [Jatropha curcas]
6 Hb_000690_160 0.0885612335 - - PREDICTED: uncharacterized protein LOC105121500 [Populus euphratica]
7 Hb_000053_110 0.0892678838 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004678_040 0.0909797437 - - PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Jatropha curcas]
9 Hb_005288_150 0.0910062594 - - PREDICTED: casein kinase I-like isoform X3 [Jatropha curcas]
10 Hb_000141_250 0.0958392279 - - PREDICTED: oxysterol-binding protein-related protein 2A isoform X3 [Jatropha curcas]
11 Hb_008511_130 0.0972487177 - - PREDICTED: probable phenylalanine--tRNA ligase alpha subunit [Jatropha curcas]
12 Hb_000205_190 0.0995635847 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
13 Hb_000260_100 0.0999791382 - - conserved hypothetical protein [Ricinus communis]
14 Hb_171376_010 0.1000918998 - - PREDICTED: uncharacterized protein LOC105630877 isoform X1 [Jatropha curcas]
15 Hb_002490_020 0.1002830543 - - peptidyl-tRNA hydrolase family protein [Populus trichocarpa]
16 Hb_001158_070 0.1011936489 - - Protein DEK, putative [Ricinus communis]
17 Hb_009421_020 0.1013548229 - - PREDICTED: caltractin-like [Jatropha curcas]
18 Hb_000869_020 0.1015797808 - - PREDICTED: uncharacterized protein LOC105641036 [Jatropha curcas]
19 Hb_075751_010 0.1024177517 - - PREDICTED: uncharacterized protein LOC105635783 isoform X2 [Jatropha curcas]
20 Hb_001975_090 0.1028120262 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]

Gene co-expression network

sample Hb_006817_010 Hb_006817_010 Hb_000866_010 Hb_000866_010 Hb_006817_010--Hb_000866_010 Hb_012725_070 Hb_012725_070 Hb_006817_010--Hb_012725_070 Hb_000808_050 Hb_000808_050 Hb_006817_010--Hb_000808_050 Hb_000390_170 Hb_000390_170 Hb_006817_010--Hb_000390_170 Hb_000690_160 Hb_000690_160 Hb_006817_010--Hb_000690_160 Hb_000053_110 Hb_000053_110 Hb_006817_010--Hb_000053_110 Hb_000866_010--Hb_000053_110 Hb_009421_020 Hb_009421_020 Hb_000866_010--Hb_009421_020 Hb_007389_010 Hb_007389_010 Hb_000866_010--Hb_007389_010 Hb_000260_100 Hb_000260_100 Hb_000866_010--Hb_000260_100 Hb_002235_250 Hb_002235_250 Hb_000866_010--Hb_002235_250 Hb_000141_250 Hb_000141_250 Hb_012725_070--Hb_000141_250 Hb_005288_150 Hb_005288_150 Hb_012725_070--Hb_005288_150 Hb_012725_070--Hb_000808_050 Hb_011013_010 Hb_011013_010 Hb_012725_070--Hb_011013_010 Hb_012725_070--Hb_000260_100 Hb_000808_050--Hb_000141_250 Hb_002542_020 Hb_002542_020 Hb_000808_050--Hb_002542_020 Hb_008511_130 Hb_008511_130 Hb_000808_050--Hb_008511_130 Hb_000599_180 Hb_000599_180 Hb_000808_050--Hb_000599_180 Hb_001472_060 Hb_001472_060 Hb_000808_050--Hb_001472_060 Hb_000390_170--Hb_008511_130 Hb_000390_170--Hb_000141_250 Hb_000390_170--Hb_005288_150 Hb_003020_010 Hb_003020_010 Hb_000390_170--Hb_003020_010 Hb_002950_100 Hb_002950_100 Hb_000390_170--Hb_002950_100 Hb_000690_160--Hb_000866_010 Hb_000753_240 Hb_000753_240 Hb_000690_160--Hb_000753_240 Hb_075751_010 Hb_075751_010 Hb_000690_160--Hb_075751_010 Hb_004440_020 Hb_004440_020 Hb_000690_160--Hb_004440_020 Hb_000768_170 Hb_000768_170 Hb_000690_160--Hb_000768_170 Hb_004970_190 Hb_004970_190 Hb_000053_110--Hb_004970_190 Hb_012395_230 Hb_012395_230 Hb_000053_110--Hb_012395_230 Hb_005271_220 Hb_005271_220 Hb_000053_110--Hb_005271_220 Hb_000261_020 Hb_000261_020 Hb_000053_110--Hb_000261_020 Hb_010222_020 Hb_010222_020 Hb_000053_110--Hb_010222_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.64661 2.82253 6.17053 2.92572 3.74899 3.82638
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.91864 4.31806 5.35055 1.88174 3.59213

CAGE analysis