Hb_075751_010

Information

Type -
Description -
Location Contig75751: 629-2380
Sequence    

Annotation

kegg
ID rcu:RCOM_0422030
description hypothetical protein
nr
ID XP_012074274.1
description PREDICTED: uncharacterized protein LOC105635783 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KM48
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08727 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_075751_010 0.0 - - PREDICTED: uncharacterized protein LOC105635783 isoform X2 [Jatropha curcas]
2 Hb_000690_160 0.0839536198 - - PREDICTED: uncharacterized protein LOC105121500 [Populus euphratica]
3 Hb_000603_230 0.0924403493 - - copper-transporting atpase paa1, putative [Ricinus communis]
4 Hb_001975_090 0.0927934048 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
5 Hb_000869_020 0.0957817625 - - PREDICTED: uncharacterized protein LOC105641036 [Jatropha curcas]
6 Hb_000866_010 0.0960838005 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000866_260 0.0976424228 - - PREDICTED: F-box/kelch-repeat protein SKIP4 isoform X1 [Jatropha curcas]
8 Hb_000753_240 0.1014110487 - - PREDICTED: ADP,ATP carrier protein ER-ANT1 [Jatropha curcas]
9 Hb_006817_010 0.1024177517 - - PREDICTED: serine/threonine-protein kinase CTR1 isoform X1 [Jatropha curcas]
10 Hb_002600_090 0.1044033679 - - ATP binding protein, putative [Ricinus communis]
11 Hb_175557_010 0.1044044302 - - glutamate-1-semialdehyde 2,1-aminomutase, putative [Ricinus communis]
12 Hb_007389_010 0.1068504636 - - PREDICTED: THO complex subunit 7A [Jatropha curcas]
13 Hb_012022_150 0.1094359549 - - PREDICTED: protein root UVB sensitive 5 [Jatropha curcas]
14 Hb_004970_190 0.1119360676 - - DCL protein, chloroplast precursor, putative [Ricinus communis]
15 Hb_008096_010 0.112441596 - - hypothetical protein MTR_1g045660 [Medicago truncatula]
16 Hb_002235_250 0.1137190196 - - PREDICTED: cystathionine gamma-synthase 1, chloroplastic [Jatropha curcas]
17 Hb_003029_070 0.1143011813 - - PREDICTED: beta-carotene isomerase D27, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_000046_040 0.1144764825 - - conserved hypothetical protein [Ricinus communis]
19 Hb_007811_030 0.1152825997 - - ABC transporter family protein [Hevea brasiliensis]
20 Hb_001700_010 0.1158022589 - - PREDICTED: GTP-binding protein At2g22870 [Jatropha curcas]

Gene co-expression network

sample Hb_075751_010 Hb_075751_010 Hb_000690_160 Hb_000690_160 Hb_075751_010--Hb_000690_160 Hb_000603_230 Hb_000603_230 Hb_075751_010--Hb_000603_230 Hb_001975_090 Hb_001975_090 Hb_075751_010--Hb_001975_090 Hb_000869_020 Hb_000869_020 Hb_075751_010--Hb_000869_020 Hb_000866_010 Hb_000866_010 Hb_075751_010--Hb_000866_010 Hb_000866_260 Hb_000866_260 Hb_075751_010--Hb_000866_260 Hb_000690_160--Hb_000866_010 Hb_000753_240 Hb_000753_240 Hb_000690_160--Hb_000753_240 Hb_006817_010 Hb_006817_010 Hb_000690_160--Hb_006817_010 Hb_004440_020 Hb_004440_020 Hb_000690_160--Hb_004440_020 Hb_000768_170 Hb_000768_170 Hb_000690_160--Hb_000768_170 Hb_175557_010 Hb_175557_010 Hb_000603_230--Hb_175557_010 Hb_002600_090 Hb_002600_090 Hb_000603_230--Hb_002600_090 Hb_002871_190 Hb_002871_190 Hb_000603_230--Hb_002871_190 Hb_003082_030 Hb_003082_030 Hb_000603_230--Hb_003082_030 Hb_010931_130 Hb_010931_130 Hb_000603_230--Hb_010931_130 Hb_000205_190 Hb_000205_190 Hb_001975_090--Hb_000205_190 Hb_004970_190 Hb_004970_190 Hb_001975_090--Hb_004970_190 Hb_000804_040 Hb_000804_040 Hb_001975_090--Hb_000804_040 Hb_001001_080 Hb_001001_080 Hb_001975_090--Hb_001001_080 Hb_001700_010 Hb_001700_010 Hb_001975_090--Hb_001700_010 Hb_001975_090--Hb_000869_020 Hb_003513_010 Hb_003513_010 Hb_000869_020--Hb_003513_010 Hb_000869_020--Hb_004970_190 Hb_004052_080 Hb_004052_080 Hb_000869_020--Hb_004052_080 Hb_003861_060 Hb_003861_060 Hb_000869_020--Hb_003861_060 Hb_007007_120 Hb_007007_120 Hb_000869_020--Hb_007007_120 Hb_005588_080 Hb_005588_080 Hb_000869_020--Hb_005588_080 Hb_000866_010--Hb_006817_010 Hb_000053_110 Hb_000053_110 Hb_000866_010--Hb_000053_110 Hb_009421_020 Hb_009421_020 Hb_000866_010--Hb_009421_020 Hb_007389_010 Hb_007389_010 Hb_000866_010--Hb_007389_010 Hb_000260_100 Hb_000260_100 Hb_000866_010--Hb_000260_100 Hb_002235_250 Hb_002235_250 Hb_000866_010--Hb_002235_250 Hb_000917_060 Hb_000917_060 Hb_000866_260--Hb_000917_060 Hb_000866_260--Hb_007389_010 Hb_017358_030 Hb_017358_030 Hb_000866_260--Hb_017358_030 Hb_002013_020 Hb_002013_020 Hb_000866_260--Hb_002013_020 Hb_000329_320 Hb_000329_320 Hb_000866_260--Hb_000329_320 Hb_000866_260--Hb_000753_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.35594 2.31269 7.87743 4.95718 5.69849 3.68367
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.60713 6.67999 7.91587 2.90242 8.17224

CAGE analysis