Hb_003082_030

Information

Type -
Description -
Location Contig3082: 32297-35666
Sequence    

Annotation

kegg
ID vvi:100853175
description adenylate kinase, chloroplastic
nr
ID XP_012079730.1
description PREDICTED: adenylate kinase, chloroplastic [Jatropha curcas]
swissprot
ID Q9FIJ7
description Adenylate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g47840 PE=1 SV=1
trembl
ID A0A067KH95
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14855 PE=3 SV=1
Gene Ontology
ID GO:0004017
description adenylate chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32532: 32382-35653
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003082_030 0.0 - - PREDICTED: adenylate kinase, chloroplastic [Jatropha curcas]
2 Hb_001629_080 0.091631411 - - hypothetical protein POPTR_0011s12610g [Populus trichocarpa]
3 Hb_133702_010 0.0933360037 - - PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform X1 [Jatropha curcas]
4 Hb_001766_050 0.094026451 - - PREDICTED: pentatricopeptide repeat-containing protein At3g29290 [Jatropha curcas]
5 Hb_023371_020 0.1006139653 - - PREDICTED: uncharacterized protein LOC105633512 [Jatropha curcas]
6 Hb_006132_090 0.1012307911 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
7 Hb_000665_140 0.1018681229 - - PREDICTED: protein MEMO1 [Jatropha curcas]
8 Hb_000603_230 0.1032036368 - - copper-transporting atpase paa1, putative [Ricinus communis]
9 Hb_004452_120 0.1037673226 - - PREDICTED: uncharacterized protein LOC105639574 [Jatropha curcas]
10 Hb_002600_090 0.1042384152 - - ATP binding protein, putative [Ricinus communis]
11 Hb_002871_190 0.1054322843 - - PREDICTED: uncharacterized protein LOC105628867 [Jatropha curcas]
12 Hb_003878_090 0.1056765859 - - PREDICTED: polynucleotide 3'-phosphatase ZDP [Jatropha curcas]
13 Hb_004951_060 0.1068180403 - - PREDICTED: uncharacterized protein LOC105634399 [Jatropha curcas]
14 Hb_005167_010 0.1085563193 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Jatropha curcas]
15 Hb_010368_010 0.1095862333 - - RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis]
16 Hb_107879_010 0.1096232917 - - phosphoglycerate mutase, putative [Ricinus communis]
17 Hb_003411_090 0.1097033513 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase, putative [Ricinus communis]
18 Hb_002304_150 0.1104061804 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
19 Hb_004157_050 0.1116182642 - - PREDICTED: uncharacterized protein LOC105628218 isoform X1 [Jatropha curcas]
20 Hb_002759_190 0.1124351974 - - PREDICTED: protein NLRC3 [Jatropha curcas]

Gene co-expression network

sample Hb_003082_030 Hb_003082_030 Hb_001629_080 Hb_001629_080 Hb_003082_030--Hb_001629_080 Hb_133702_010 Hb_133702_010 Hb_003082_030--Hb_133702_010 Hb_001766_050 Hb_001766_050 Hb_003082_030--Hb_001766_050 Hb_023371_020 Hb_023371_020 Hb_003082_030--Hb_023371_020 Hb_006132_090 Hb_006132_090 Hb_003082_030--Hb_006132_090 Hb_000665_140 Hb_000665_140 Hb_003082_030--Hb_000665_140 Hb_002600_090 Hb_002600_090 Hb_001629_080--Hb_002600_090 Hb_001348_170 Hb_001348_170 Hb_001629_080--Hb_001348_170 Hb_010368_010 Hb_010368_010 Hb_001629_080--Hb_010368_010 Hb_004837_270 Hb_004837_270 Hb_001629_080--Hb_004837_270 Hb_005588_080 Hb_005588_080 Hb_001629_080--Hb_005588_080 Hb_002686_170 Hb_002686_170 Hb_001629_080--Hb_002686_170 Hb_005800_030 Hb_005800_030 Hb_133702_010--Hb_005800_030 Hb_004452_120 Hb_004452_120 Hb_133702_010--Hb_004452_120 Hb_004545_110 Hb_004545_110 Hb_133702_010--Hb_004545_110 Hb_000721_030 Hb_000721_030 Hb_133702_010--Hb_000721_030 Hb_007975_060 Hb_007975_060 Hb_133702_010--Hb_007975_060 Hb_003878_090 Hb_003878_090 Hb_133702_010--Hb_003878_090 Hb_001541_120 Hb_001541_120 Hb_001766_050--Hb_001541_120 Hb_008421_020 Hb_008421_020 Hb_001766_050--Hb_008421_020 Hb_000928_070 Hb_000928_070 Hb_001766_050--Hb_000928_070 Hb_000130_220 Hb_000130_220 Hb_001766_050--Hb_000130_220 Hb_062226_060 Hb_062226_060 Hb_001766_050--Hb_062226_060 Hb_001662_130 Hb_001662_130 Hb_001766_050--Hb_001662_130 Hb_023371_020--Hb_003878_090 Hb_001141_420 Hb_001141_420 Hb_023371_020--Hb_001141_420 Hb_023371_020--Hb_004545_110 Hb_004157_050 Hb_004157_050 Hb_023371_020--Hb_004157_050 Hb_023371_020--Hb_133702_010 Hb_000260_350 Hb_000260_350 Hb_023371_020--Hb_000260_350 Hb_005167_010 Hb_005167_010 Hb_006132_090--Hb_005167_010 Hb_001900_140 Hb_001900_140 Hb_006132_090--Hb_001900_140 Hb_006132_090--Hb_003878_090 Hb_002157_120 Hb_002157_120 Hb_006132_090--Hb_002157_120 Hb_007002_020 Hb_007002_020 Hb_006132_090--Hb_007002_020 Hb_003119_060 Hb_003119_060 Hb_006132_090--Hb_003119_060 Hb_000665_140--Hb_004157_050 Hb_001301_110 Hb_001301_110 Hb_000665_140--Hb_001301_110 Hb_003058_120 Hb_003058_120 Hb_000665_140--Hb_003058_120 Hb_001218_030 Hb_001218_030 Hb_000665_140--Hb_001218_030 Hb_000853_150 Hb_000853_150 Hb_000665_140--Hb_000853_150 Hb_000167_010 Hb_000167_010 Hb_000665_140--Hb_000167_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.74961 4.18051 13.187 10.4383 4.18258 6.12939
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.9626 10.0841 9.79503 8.42046 13.2503

CAGE analysis