Hb_000540_050

Information

Type -
Description -
Location Contig540: 49123-56040
Sequence    

Annotation

kegg
ID rcu:RCOM_1264020
description Bipolar kinesin KRP-130, putative
nr
ID XP_012064936.1
description PREDICTED: 125 kDa kinesin-related protein-like [Jatropha curcas]
swissprot
ID O23826
description 125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1
trembl
ID A0A067L6R9
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_05623 PE=3 SV=1
Gene Ontology
ID GO:0005871
description 125 kda kinesin-related

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47794: 49272-55912
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000540_050 0.0 - - PREDICTED: 125 kDa kinesin-related protein-like [Jatropha curcas]
2 Hb_002026_170 0.1181902392 - - kinesin heavy chain, putative [Ricinus communis]
3 Hb_002284_310 0.1561334813 - - PREDICTED: uncharacterized protein LOC105635220 isoform X2 [Jatropha curcas]
4 Hb_114310_110 0.1653571222 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
5 Hb_004223_190 0.1693105094 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
6 Hb_000032_440 0.1746639073 - - protein with unknown function [Ricinus communis]
7 Hb_000103_530 0.1750097016 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
8 Hb_000135_030 0.1756300031 - - PREDICTED: uncharacterized protein LOC105634729 isoform X1 [Jatropha curcas]
9 Hb_007803_030 0.17632553 - - PREDICTED: uncharacterized protein LOC105632791 isoform X1 [Jatropha curcas]
10 Hb_000984_270 0.1767030232 - - conserved hypothetical protein [Ricinus communis]
11 Hb_137222_020 0.1786142222 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
12 Hb_001102_020 0.17893056 - - solanesyl diphosphate synthase [Hevea brasiliensis]
13 Hb_000108_050 0.1812755509 - - PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Jatropha curcas]
14 Hb_000317_490 0.1814053479 - - Gibberellin receptor GID1, putative [Ricinus communis]
15 Hb_003734_060 0.1820114186 - - PREDICTED: uncharacterized protein LOC105632818 isoform X2 [Jatropha curcas]
16 Hb_000072_090 0.1828514696 - - PREDICTED: SEC14 cytosolic factor [Jatropha curcas]
17 Hb_004398_030 0.1847308247 - - PREDICTED: chloroplast processing peptidase [Jatropha curcas]
18 Hb_075751_010 0.1855227864 - - PREDICTED: uncharacterized protein LOC105635783 isoform X2 [Jatropha curcas]
19 Hb_001606_060 0.1860382385 - - conserved hypothetical protein [Ricinus communis]
20 Hb_021409_180 0.1863541897 - - PREDICTED: glutamine-dependent NAD(+) synthetase [Jatropha curcas]

Gene co-expression network

sample Hb_000540_050 Hb_000540_050 Hb_002026_170 Hb_002026_170 Hb_000540_050--Hb_002026_170 Hb_002284_310 Hb_002284_310 Hb_000540_050--Hb_002284_310 Hb_114310_110 Hb_114310_110 Hb_000540_050--Hb_114310_110 Hb_004223_190 Hb_004223_190 Hb_000540_050--Hb_004223_190 Hb_000032_440 Hb_000032_440 Hb_000540_050--Hb_000032_440 Hb_000103_530 Hb_000103_530 Hb_000540_050--Hb_000103_530 Hb_000019_150 Hb_000019_150 Hb_002026_170--Hb_000019_150 Hb_001472_060 Hb_001472_060 Hb_002026_170--Hb_001472_060 Hb_000808_050 Hb_000808_050 Hb_002026_170--Hb_000808_050 Hb_001511_050 Hb_001511_050 Hb_002026_170--Hb_001511_050 Hb_002498_140 Hb_002498_140 Hb_002026_170--Hb_002498_140 Hb_000603_230 Hb_000603_230 Hb_002284_310--Hb_000603_230 Hb_003992_170 Hb_003992_170 Hb_002284_310--Hb_003992_170 Hb_000331_460 Hb_000331_460 Hb_002284_310--Hb_000331_460 Hb_002871_190 Hb_002871_190 Hb_002284_310--Hb_002871_190 Hb_004225_080 Hb_004225_080 Hb_002284_310--Hb_004225_080 Hb_004346_030 Hb_004346_030 Hb_002284_310--Hb_004346_030 Hb_000135_030 Hb_000135_030 Hb_114310_110--Hb_000135_030 Hb_000608_170 Hb_000608_170 Hb_114310_110--Hb_000608_170 Hb_004398_030 Hb_004398_030 Hb_114310_110--Hb_004398_030 Hb_000928_010 Hb_000928_010 Hb_114310_110--Hb_000928_010 Hb_000371_100 Hb_000371_100 Hb_114310_110--Hb_000371_100 Hb_185447_010 Hb_185447_010 Hb_114310_110--Hb_185447_010 Hb_002078_160 Hb_002078_160 Hb_004223_190--Hb_002078_160 Hb_000281_110 Hb_000281_110 Hb_004223_190--Hb_000281_110 Hb_004223_190--Hb_000135_030 Hb_001482_040 Hb_001482_040 Hb_004223_190--Hb_001482_040 Hb_011486_040 Hb_011486_040 Hb_004223_190--Hb_011486_040 Hb_001898_210 Hb_001898_210 Hb_004223_190--Hb_001898_210 Hb_000317_490 Hb_000317_490 Hb_000032_440--Hb_000317_490 Hb_000708_040 Hb_000708_040 Hb_000032_440--Hb_000708_040 Hb_000032_440--Hb_002284_310 Hb_000243_080 Hb_000243_080 Hb_000032_440--Hb_000243_080 Hb_002183_070 Hb_002183_070 Hb_000032_440--Hb_002183_070 Hb_003016_020 Hb_003016_020 Hb_000032_440--Hb_003016_020 Hb_000103_480 Hb_000103_480 Hb_000103_530--Hb_000103_480 Hb_007002_020 Hb_007002_020 Hb_000103_530--Hb_007002_020 Hb_001700_010 Hb_001700_010 Hb_000103_530--Hb_001700_010 Hb_004097_130 Hb_004097_130 Hb_000103_530--Hb_004097_130 Hb_012305_100 Hb_012305_100 Hb_000103_530--Hb_012305_100 Hb_004583_010 Hb_004583_010 Hb_000103_530--Hb_004583_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.9759 1.54462 30.0013 16.9689 11.2682 14.142
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
20.7008 5.50064 27.4003 3.46004 23.0012

CAGE analysis