Hb_001511_050

Information

Type -
Description -
Location Contig1511: 91066-94047
Sequence    

Annotation

kegg
ID rcu:RCOM_0839760
description hypothetical protein
nr
ID XP_012086949.1
description PREDICTED: probable inactive serine/threonine-protein kinase bub1 isoform X1 [Jatropha curcas]
swissprot
ID O22806
description Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis thaliana GN=BUBR1 PE=1 SV=2
trembl
ID A0A067LC11
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01223 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12759: 92093-92451 , PASA_asmbl_12760: 93031-93976
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001511_050 0.0 - - PREDICTED: probable inactive serine/threonine-protein kinase bub1 isoform X1 [Jatropha curcas]
2 Hb_001348_170 0.1216171695 - - PREDICTED: filament-like plant protein isoform X2 [Jatropha curcas]
3 Hb_002028_150 0.126138302 - - PREDICTED: hepatocyte growth factor-regulated tyrosine kinase substrate [Jatropha curcas]
4 Hb_000088_190 0.1316822804 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002026_170 0.1355797181 - - kinesin heavy chain, putative [Ricinus communis]
6 Hb_004837_270 0.1379768466 - - PREDICTED: cinnamoyl-CoA reductase 1 [Jatropha curcas]
7 Hb_001205_120 0.1432286848 - - PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Populus euphratica]
8 Hb_005333_060 0.1452019909 - - PREDICTED: uncharacterized protein LOC105630688 [Jatropha curcas]
9 Hb_003363_070 0.1457306022 - - -
10 Hb_002687_120 0.1472378611 - - PREDICTED: lipoyl synthase, chloroplastic [Jatropha curcas]
11 Hb_000207_300 0.1517364201 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic-like [Jatropha curcas]
12 Hb_010931_070 0.1530980449 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Jatropha curcas]
13 Hb_001472_060 0.1557763685 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Jatropha curcas]
14 Hb_000025_030 0.1566203833 - - transcription factor, putative [Ricinus communis]
15 Hb_001799_030 0.1566891504 - - PREDICTED: ELMO domain-containing protein C-like [Jatropha curcas]
16 Hb_002498_140 0.1581763744 - - PREDICTED: peroxisomal membrane protein PMP22-like isoform X1 [Solanum lycopersicum]
17 Hb_042729_020 0.1584762767 - - PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
18 Hb_137222_020 0.1584767604 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
19 Hb_000808_050 0.1585164259 - - exonuclease, putative [Ricinus communis]
20 Hb_000815_070 0.1596986781 - - PREDICTED: methyltransferase-like protein 7A [Jatropha curcas]

Gene co-expression network

sample Hb_001511_050 Hb_001511_050 Hb_001348_170 Hb_001348_170 Hb_001511_050--Hb_001348_170 Hb_002028_150 Hb_002028_150 Hb_001511_050--Hb_002028_150 Hb_000088_190 Hb_000088_190 Hb_001511_050--Hb_000088_190 Hb_002026_170 Hb_002026_170 Hb_001511_050--Hb_002026_170 Hb_004837_270 Hb_004837_270 Hb_001511_050--Hb_004837_270 Hb_001205_120 Hb_001205_120 Hb_001511_050--Hb_001205_120 Hb_001348_170--Hb_004837_270 Hb_001629_080 Hb_001629_080 Hb_001348_170--Hb_001629_080 Hb_002686_170 Hb_002686_170 Hb_001348_170--Hb_002686_170 Hb_000621_070 Hb_000621_070 Hb_001348_170--Hb_000621_070 Hb_000035_500 Hb_000035_500 Hb_001348_170--Hb_000035_500 Hb_004070_020 Hb_004070_020 Hb_001348_170--Hb_004070_020 Hb_034482_020 Hb_034482_020 Hb_002028_150--Hb_034482_020 Hb_000976_430 Hb_000976_430 Hb_002028_150--Hb_000976_430 Hb_000207_050 Hb_000207_050 Hb_002028_150--Hb_000207_050 Hb_130279_010 Hb_130279_010 Hb_002028_150--Hb_130279_010 Hb_002374_100 Hb_002374_100 Hb_002028_150--Hb_002374_100 Hb_002028_150--Hb_001205_120 Hb_171900_040 Hb_171900_040 Hb_000088_190--Hb_171900_040 Hb_000757_030 Hb_000757_030 Hb_000088_190--Hb_000757_030 Hb_010931_070 Hb_010931_070 Hb_000088_190--Hb_010931_070 Hb_003363_070 Hb_003363_070 Hb_000088_190--Hb_003363_070 Hb_002498_140 Hb_002498_140 Hb_000088_190--Hb_002498_140 Hb_000046_040 Hb_000046_040 Hb_000088_190--Hb_000046_040 Hb_000540_050 Hb_000540_050 Hb_002026_170--Hb_000540_050 Hb_000019_150 Hb_000019_150 Hb_002026_170--Hb_000019_150 Hb_001472_060 Hb_001472_060 Hb_002026_170--Hb_001472_060 Hb_000808_050 Hb_000808_050 Hb_002026_170--Hb_000808_050 Hb_002026_170--Hb_002498_140 Hb_004837_270--Hb_002686_170 Hb_004837_270--Hb_001629_080 Hb_000110_310 Hb_000110_310 Hb_004837_270--Hb_000110_310 Hb_001799_030 Hb_001799_030 Hb_004837_270--Hb_001799_030 Hb_000731_160 Hb_000731_160 Hb_004837_270--Hb_000731_160 Hb_000441_220 Hb_000441_220 Hb_001205_120--Hb_000441_220 Hb_002044_150 Hb_002044_150 Hb_001205_120--Hb_002044_150 Hb_001584_140 Hb_001584_140 Hb_001205_120--Hb_001584_140 Hb_023344_120 Hb_023344_120 Hb_001205_120--Hb_023344_120 Hb_000915_260 Hb_000915_260 Hb_001205_120--Hb_000915_260 Hb_168978_030 Hb_168978_030 Hb_001205_120--Hb_168978_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.75707 0.489218 4.78881 1.78044 1.41593 1.80714
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.36961 1.24293 3.71392 3.16187 2.23779

CAGE analysis