Hb_000915_260

Information

Type -
Description -
Location Contig915: 238101-242645
Sequence    

Annotation

kegg
ID rcu:RCOM_0291670
description hypothetical protein
nr
ID XP_012065327.1
description PREDICTED: uncharacterized protein LOC105628514 isoform X1 [Jatropha curcas]
swissprot
ID Q9FN50
description Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana GN=CPP1 PE=1 SV=1
trembl
ID A0A067LP87
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06483 PE=4 SV=1
Gene Ontology
ID GO:0009706
description PREDICTED: uncharacterized protein LOC105628514 isoform X1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62239: 238049-242607 , PASA_asmbl_62240: 238882-239276
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000915_260 0.0 - - PREDICTED: uncharacterized protein LOC105628514 isoform X1 [Jatropha curcas]
2 Hb_009898_050 0.0615528475 - - PREDICTED: beta-taxilin [Jatropha curcas]
3 Hb_002276_170 0.0699331485 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
4 Hb_001141_020 0.0731728574 - - PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
5 Hb_168978_030 0.0757585913 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
6 Hb_006153_070 0.0760943097 - - 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Jatropha curcas]
7 Hb_001205_120 0.0772098562 - - PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Populus euphratica]
8 Hb_000139_370 0.0776442865 - - ubiquitin-activating enzyme E1c, putative [Ricinus communis]
9 Hb_001584_140 0.0818909052 - - PREDICTED: uncharacterized protein LOC105647409 [Jatropha curcas]
10 Hb_001279_030 0.082199923 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
11 Hb_032986_010 0.0830395947 - - Nicotinate-nucleotide pyrophosphorylase [carboxylating], putative [Ricinus communis]
12 Hb_026198_070 0.0846552816 - - PREDICTED: uncharacterized membrane protein At4g09580 [Jatropha curcas]
13 Hb_005291_050 0.0852663851 - - PREDICTED: mannan endo-1,4-beta-mannosidase 6-like isoform X1 [Jatropha curcas]
14 Hb_000062_370 0.0855518468 - - beta-ketoacyl-ACP reductase [Vernicia fordii]
15 Hb_000254_090 0.0858709348 - - PREDICTED: la protein 2 [Jatropha curcas]
16 Hb_000640_170 0.0865744191 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
17 Hb_007811_030 0.086671901 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_002044_150 0.0873938813 - - PREDICTED: A/G-specific adenine DNA glycosylase isoform X1 [Jatropha curcas]
19 Hb_002835_040 0.0881322454 - - PREDICTED: quinolinate synthase, chloroplastic [Jatropha curcas]
20 Hb_001205_250 0.0883809452 - - PREDICTED: uncharacterized protein LOC105643856 [Jatropha curcas]

Gene co-expression network

sample Hb_000915_260 Hb_000915_260 Hb_009898_050 Hb_009898_050 Hb_000915_260--Hb_009898_050 Hb_002276_170 Hb_002276_170 Hb_000915_260--Hb_002276_170 Hb_001141_020 Hb_001141_020 Hb_000915_260--Hb_001141_020 Hb_168978_030 Hb_168978_030 Hb_000915_260--Hb_168978_030 Hb_006153_070 Hb_006153_070 Hb_000915_260--Hb_006153_070 Hb_001205_120 Hb_001205_120 Hb_000915_260--Hb_001205_120 Hb_009898_050--Hb_006153_070 Hb_000110_310 Hb_000110_310 Hb_009898_050--Hb_000110_310 Hb_008616_050 Hb_008616_050 Hb_009898_050--Hb_008616_050 Hb_000640_170 Hb_000640_170 Hb_009898_050--Hb_000640_170 Hb_000579_120 Hb_000579_120 Hb_009898_050--Hb_000579_120 Hb_000313_260 Hb_000313_260 Hb_002276_170--Hb_000313_260 Hb_001047_220 Hb_001047_220 Hb_002276_170--Hb_001047_220 Hb_000317_470 Hb_000317_470 Hb_002276_170--Hb_000317_470 Hb_001632_040 Hb_001632_040 Hb_002276_170--Hb_001632_040 Hb_004414_060 Hb_004414_060 Hb_002276_170--Hb_004414_060 Hb_009467_060 Hb_009467_060 Hb_001141_020--Hb_009467_060 Hb_188063_020 Hb_188063_020 Hb_001141_020--Hb_188063_020 Hb_003025_110 Hb_003025_110 Hb_001141_020--Hb_003025_110 Hb_000883_020 Hb_000883_020 Hb_001141_020--Hb_000883_020 Hb_009548_020 Hb_009548_020 Hb_001141_020--Hb_009548_020 Hb_030736_100 Hb_030736_100 Hb_001141_020--Hb_030736_100 Hb_168978_030--Hb_000640_170 Hb_000035_470 Hb_000035_470 Hb_168978_030--Hb_000035_470 Hb_000617_180 Hb_000617_180 Hb_168978_030--Hb_000617_180 Hb_105328_020 Hb_105328_020 Hb_168978_030--Hb_105328_020 Hb_002044_150 Hb_002044_150 Hb_168978_030--Hb_002044_150 Hb_000156_010 Hb_000156_010 Hb_168978_030--Hb_000156_010 Hb_006153_070--Hb_000110_310 Hb_007831_010 Hb_007831_010 Hb_006153_070--Hb_007831_010 Hb_006153_070--Hb_168978_030 Hb_006153_070--Hb_000640_170 Hb_006153_070--Hb_000579_120 Hb_000441_220 Hb_000441_220 Hb_001205_120--Hb_000441_220 Hb_001205_120--Hb_002044_150 Hb_001584_140 Hb_001584_140 Hb_001205_120--Hb_001584_140 Hb_023344_120 Hb_023344_120 Hb_001205_120--Hb_023344_120 Hb_001205_120--Hb_168978_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.507 5.29137 15.1542 15.0633 16.6278 17.3409
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.655 10.7384 14.476 14.0474 16.9

CAGE analysis