Hb_001141_020

Information

Type -
Description -
Location Contig1141: 17667-24081
Sequence    

Annotation

kegg
ID rcu:RCOM_0911270
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012069689.1
description PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
swissprot
ID O16259
description Stress-induced-phosphoprotein 1 OS=Caenorhabditis elegans GN=sti-1 PE=1 SV=1
trembl
ID A0A067KVT9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02220 PE=4 SV=1
Gene Ontology
ID GO:0005829
description stress-induced-phosphoprotein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04225: 17864-23934
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001141_020 0.0 - - PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
2 Hb_009467_060 0.051920431 - - PREDICTED: chromo domain-containing protein LHP1 isoform X1 [Jatropha curcas]
3 Hb_188063_020 0.0610843294 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003025_110 0.0661735425 - - PREDICTED: serine/threonine-protein kinase HT1 isoform X1 [Jatropha curcas]
5 Hb_000883_020 0.0695357235 - - PREDICTED: casein kinase II subunit beta-like isoform X5 [Jatropha curcas]
6 Hb_009548_020 0.0705412947 - - structural constituent of cell wall, putative [Ricinus communis]
7 Hb_030736_100 0.0717410396 - - conserved hypothetical protein [Ricinus communis]
8 Hb_062135_030 0.072170641 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
9 Hb_004619_030 0.0727235757 - - PREDICTED: uncharacterized protein LOC105633364 isoform X1 [Jatropha curcas]
10 Hb_000915_260 0.0731728574 - - PREDICTED: uncharacterized protein LOC105628514 isoform X1 [Jatropha curcas]
11 Hb_028089_010 0.0748026181 - - PREDICTED: homoserine dehydrogenase [Jatropha curcas]
12 Hb_003939_050 0.0752914539 - - protein with unknown function [Ricinus communis]
13 Hb_011930_160 0.0756367283 - - PREDICTED: tetratricopeptide repeat protein 38-like [Jatropha curcas]
14 Hb_004963_030 0.0763303477 - - PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Jatropha curcas]
15 Hb_000076_130 0.0765832113 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
16 Hb_002997_080 0.0767751483 - - PREDICTED: uncharacterized protein LOC105631115 [Jatropha curcas]
17 Hb_010710_070 0.0774388333 - - PREDICTED: protein TOC75-3, chloroplastic-like [Populus euphratica]
18 Hb_002271_030 0.077938649 - - Vacuolar protein sorting protein, putative [Ricinus communis]
19 Hb_023480_010 0.0789108601 - - cellular nucleic acid binding protein, putative [Ricinus communis]
20 Hb_004994_380 0.07918324 - - hypothetical protein JCGZ_14410 [Jatropha curcas]

Gene co-expression network

sample Hb_001141_020 Hb_001141_020 Hb_009467_060 Hb_009467_060 Hb_001141_020--Hb_009467_060 Hb_188063_020 Hb_188063_020 Hb_001141_020--Hb_188063_020 Hb_003025_110 Hb_003025_110 Hb_001141_020--Hb_003025_110 Hb_000883_020 Hb_000883_020 Hb_001141_020--Hb_000883_020 Hb_009548_020 Hb_009548_020 Hb_001141_020--Hb_009548_020 Hb_030736_100 Hb_030736_100 Hb_001141_020--Hb_030736_100 Hb_009467_060--Hb_003025_110 Hb_001199_020 Hb_001199_020 Hb_009467_060--Hb_001199_020 Hb_002271_030 Hb_002271_030 Hb_009467_060--Hb_002271_030 Hb_000025_110 Hb_000025_110 Hb_009467_060--Hb_000025_110 Hb_001006_140 Hb_001006_140 Hb_009467_060--Hb_001006_140 Hb_004225_050 Hb_004225_050 Hb_188063_020--Hb_004225_050 Hb_002849_100 Hb_002849_100 Hb_188063_020--Hb_002849_100 Hb_028912_050 Hb_028912_050 Hb_188063_020--Hb_028912_050 Hb_010710_070 Hb_010710_070 Hb_188063_020--Hb_010710_070 Hb_004963_030 Hb_004963_030 Hb_188063_020--Hb_004963_030 Hb_188063_020--Hb_009548_020 Hb_004410_030 Hb_004410_030 Hb_003025_110--Hb_004410_030 Hb_000011_200 Hb_000011_200 Hb_003025_110--Hb_000011_200 Hb_001946_010 Hb_001946_010 Hb_003025_110--Hb_001946_010 Hb_007575_050 Hb_007575_050 Hb_003025_110--Hb_007575_050 Hb_011930_160 Hb_011930_160 Hb_003025_110--Hb_011930_160 Hb_000617_180 Hb_000617_180 Hb_003025_110--Hb_000617_180 Hb_009545_080 Hb_009545_080 Hb_000883_020--Hb_009545_080 Hb_002997_080 Hb_002997_080 Hb_000883_020--Hb_002997_080 Hb_011995_010 Hb_011995_010 Hb_000883_020--Hb_011995_010 Hb_000230_560 Hb_000230_560 Hb_000883_020--Hb_000230_560 Hb_032986_010 Hb_032986_010 Hb_000883_020--Hb_032986_010 Hb_001357_350 Hb_001357_350 Hb_000883_020--Hb_001357_350 Hb_002835_370 Hb_002835_370 Hb_009548_020--Hb_002835_370 Hb_000072_220 Hb_000072_220 Hb_009548_020--Hb_000072_220 Hb_006634_070 Hb_006634_070 Hb_009548_020--Hb_006634_070 Hb_016172_020 Hb_016172_020 Hb_009548_020--Hb_016172_020 Hb_012022_090 Hb_012022_090 Hb_009548_020--Hb_012022_090 Hb_003939_050 Hb_003939_050 Hb_030736_100--Hb_003939_050 Hb_030736_100--Hb_003025_110 Hb_030736_100--Hb_000883_020 Hb_000575_040 Hb_000575_040 Hb_030736_100--Hb_000575_040 Hb_030736_100--Hb_002271_030 Hb_000879_200 Hb_000879_200 Hb_030736_100--Hb_000879_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.04174 3.86231 5.66662 5.38856 8.06131 9.63727
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.22198 4.96316 7.47928 5.95904 7.49145

CAGE analysis