Hb_001632_040

Information

Type -
Description -
Location Contig1632: 54474-57522
Sequence    

Annotation

kegg
ID tcc:TCM_014242
description Transmembrane protein adipocyte-associated 1 isoform 1
nr
ID XP_012080365.1
description PREDICTED: transmembrane protein adipocyte-associated 1 homolog isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGF4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11711 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14871: 54414-57448
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001632_040 0.0 - - PREDICTED: transmembrane protein adipocyte-associated 1 homolog isoform X1 [Jatropha curcas]
2 Hb_004414_060 0.0579827299 - - hypothetical protein JCGZ_17225 [Jatropha curcas]
3 Hb_002276_170 0.0756304915 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
4 Hb_114310_090 0.0836486606 - - PREDICTED: low-temperature-induced cysteine proteinase [Jatropha curcas]
5 Hb_001243_040 0.0850345415 - - PREDICTED: uncharacterized protein LOC104104316 [Nicotiana tomentosiformis]
6 Hb_004907_080 0.0876715008 - - zinc finger protein, putative [Ricinus communis]
7 Hb_000342_130 0.0877062217 - - PREDICTED: uncharacterized protein LOC105638175 isoform X1 [Jatropha curcas]
8 Hb_000313_260 0.0890099781 - - auxin:hydrogen symporter, putative [Ricinus communis]
9 Hb_001135_220 0.0899467523 - - FGFR1 oncogene partner, putative [Ricinus communis]
10 Hb_000317_470 0.0915748516 - - PREDICTED: CCR4-NOT transcription complex subunit 11 [Jatropha curcas]
11 Hb_003163_020 0.0916721113 - - PREDICTED: polyadenylate-binding protein-interacting protein 12-like isoform X1 [Jatropha curcas]
12 Hb_007416_330 0.0971407298 - - PREDICTED: elongation factor 1-alpha isoform X1 [Jatropha curcas]
13 Hb_000025_640 0.0984272646 - - PREDICTED: probable magnesium transporter NIPA6 isoform X1 [Jatropha curcas]
14 Hb_002835_040 0.0986778993 - - PREDICTED: quinolinate synthase, chloroplastic [Jatropha curcas]
15 Hb_132835_010 0.0988533447 - - PREDICTED: RING-H2 finger protein ATL8-like isoform X2 [Jatropha curcas]
16 Hb_002805_270 0.0989552277 - - PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_001493_030 0.0990973765 - - hypothetical protein MIMGU_mgv1a005351mg [Erythranthe guttata]
18 Hb_001696_010 0.0991100205 - - PREDICTED: serine/threonine-protein kinase 38-like isoform X3 [Jatropha curcas]
19 Hb_000777_040 0.0995823227 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
20 Hb_001635_180 0.1008509249 - - PREDICTED: F-box/FBD/LRR-repeat protein At5g53840-like [Jatropha curcas]

Gene co-expression network

sample Hb_001632_040 Hb_001632_040 Hb_004414_060 Hb_004414_060 Hb_001632_040--Hb_004414_060 Hb_002276_170 Hb_002276_170 Hb_001632_040--Hb_002276_170 Hb_114310_090 Hb_114310_090 Hb_001632_040--Hb_114310_090 Hb_001243_040 Hb_001243_040 Hb_001632_040--Hb_001243_040 Hb_004907_080 Hb_004907_080 Hb_001632_040--Hb_004907_080 Hb_000342_130 Hb_000342_130 Hb_001632_040--Hb_000342_130 Hb_002835_040 Hb_002835_040 Hb_004414_060--Hb_002835_040 Hb_003964_070 Hb_003964_070 Hb_004414_060--Hb_003964_070 Hb_003163_020 Hb_003163_020 Hb_004414_060--Hb_003163_020 Hb_001493_030 Hb_001493_030 Hb_004414_060--Hb_001493_030 Hb_007317_110 Hb_007317_110 Hb_004414_060--Hb_007317_110 Hb_000313_260 Hb_000313_260 Hb_002276_170--Hb_000313_260 Hb_000915_260 Hb_000915_260 Hb_002276_170--Hb_000915_260 Hb_001047_220 Hb_001047_220 Hb_002276_170--Hb_001047_220 Hb_000317_470 Hb_000317_470 Hb_002276_170--Hb_000317_470 Hb_002276_170--Hb_004414_060 Hb_114310_090--Hb_001243_040 Hb_007416_330 Hb_007416_330 Hb_114310_090--Hb_007416_330 Hb_032202_140 Hb_032202_140 Hb_114310_090--Hb_032202_140 Hb_002013_020 Hb_002013_020 Hb_114310_090--Hb_002013_020 Hb_123915_040 Hb_123915_040 Hb_114310_090--Hb_123915_040 Hb_018133_040 Hb_018133_040 Hb_001243_040--Hb_018133_040 Hb_000731_270 Hb_000731_270 Hb_001243_040--Hb_000731_270 Hb_001696_010 Hb_001696_010 Hb_001243_040--Hb_001696_010 Hb_001322_170 Hb_001322_170 Hb_001243_040--Hb_001322_170 Hb_001009_270 Hb_001009_270 Hb_004907_080--Hb_001009_270 Hb_000451_010 Hb_000451_010 Hb_004907_080--Hb_000451_010 Hb_011671_240 Hb_011671_240 Hb_004907_080--Hb_011671_240 Hb_032208_090 Hb_032208_090 Hb_004907_080--Hb_032208_090 Hb_003177_030 Hb_003177_030 Hb_004907_080--Hb_003177_030 Hb_000777_040 Hb_000777_040 Hb_004907_080--Hb_000777_040 Hb_000120_790 Hb_000120_790 Hb_000342_130--Hb_000120_790 Hb_004841_010 Hb_004841_010 Hb_000342_130--Hb_004841_010 Hb_000173_290 Hb_000173_290 Hb_000342_130--Hb_000173_290 Hb_065500_060 Hb_065500_060 Hb_000342_130--Hb_065500_060 Hb_000883_020 Hb_000883_020 Hb_000342_130--Hb_000883_020 Hb_000331_260 Hb_000331_260 Hb_000342_130--Hb_000331_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.2293 7.78461 14.5639 14.3653 29.4159 16.8829
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.8143 18.002 23.5753 16.4833 13.3028

CAGE analysis