Hb_000928_010

Information

Type -
Description -
Location Contig928: 2444-8501
Sequence    

Annotation

kegg
ID rcu:RCOM_0516940
description Cell division protein ftsZ, putative
nr
ID XP_002528741.1
description Cell division protein ftsZ, putative [Ricinus communis]
swissprot
ID Q9LXJ0
description Cell division protein FtsZ homolog 2-2, chloroplastic OS=Arabidopsis thaliana GN=FTSZ2-2 PE=1 SV=1
trembl
ID B9SRX2
description Cell division protein ftsZ, putative OS=Ricinus communis GN=RCOM_0516940 PE=3 SV=1
Gene Ontology
ID GO:0005737
description cell division protein homolog 2- chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62738: 2508-8506
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000928_010 0.0 - - Cell division protein ftsZ, putative [Ricinus communis]
2 Hb_000608_170 0.0739170315 - - F23N19.4 [Arabidopsis thaliana]
3 Hb_000462_090 0.1011242299 - - PREDICTED: carotene epsilon-monooxygenase, chloroplastic [Jatropha curcas]
4 Hb_000340_150 0.1155252551 - - hypothetical protein JCGZ_21975 [Jatropha curcas]
5 Hb_005282_020 0.1175200132 - - hypothetical protein PRUPE_ppa019056mg, partial [Prunus persica]
6 Hb_002685_060 0.1206917474 - - 30S ribosomal protein S5, putative [Ricinus communis]
7 Hb_001584_200 0.1221950063 - - PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA [Jatropha curcas]
8 Hb_002217_260 0.1274496206 - - PREDICTED: uncharacterized protein LOC105643577 [Jatropha curcas]
9 Hb_003376_230 0.1305247627 - - PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]
10 Hb_000340_100 0.1307191242 - - PREDICTED: protein PALE CRESS, chloroplastic [Jatropha curcas]
11 Hb_011512_110 0.1370800027 - - PREDICTED: GDT1-like protein 2, chloroplastic isoform X1 [Jatropha curcas]
12 Hb_000028_110 0.1376431936 - - PREDICTED: uncharacterized protein LOC105645305 [Jatropha curcas]
13 Hb_114310_110 0.137863665 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
14 Hb_005672_020 0.1381508237 - - PREDICTED: 50S ribosomal protein L6, chloroplastic [Jatropha curcas]
15 Hb_002660_190 0.1392152469 - - PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]
16 Hb_000107_570 0.1406295474 - - PREDICTED: uncharacterized protein LOC105634044 isoform X1 [Jatropha curcas]
17 Hb_002078_340 0.1422371344 - - PREDICTED: uncharacterized protein LOC105644820 isoform X2 [Jatropha curcas]
18 Hb_003994_110 0.1432378602 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105646130 [Jatropha curcas]
19 Hb_003976_020 0.1440071432 - - Regulator of ribonuclease activity A, putative [Ricinus communis]
20 Hb_001341_070 0.1444317358 - - PREDICTED: uncharacterized protein LOC105628138 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000928_010 Hb_000928_010 Hb_000608_170 Hb_000608_170 Hb_000928_010--Hb_000608_170 Hb_000462_090 Hb_000462_090 Hb_000928_010--Hb_000462_090 Hb_000340_150 Hb_000340_150 Hb_000928_010--Hb_000340_150 Hb_005282_020 Hb_005282_020 Hb_000928_010--Hb_005282_020 Hb_002685_060 Hb_002685_060 Hb_000928_010--Hb_002685_060 Hb_001584_200 Hb_001584_200 Hb_000928_010--Hb_001584_200 Hb_000608_170--Hb_000462_090 Hb_000608_170--Hb_005282_020 Hb_000608_170--Hb_002685_060 Hb_114310_110 Hb_114310_110 Hb_000608_170--Hb_114310_110 Hb_000608_170--Hb_000340_150 Hb_000462_090--Hb_001584_200 Hb_000173_250 Hb_000173_250 Hb_000462_090--Hb_000173_250 Hb_000462_090--Hb_000340_150 Hb_000172_580 Hb_000172_580 Hb_000462_090--Hb_000172_580 Hb_009775_010 Hb_009775_010 Hb_000462_090--Hb_009775_010 Hb_003376_230 Hb_003376_230 Hb_000462_090--Hb_003376_230 Hb_004375_050 Hb_004375_050 Hb_000340_150--Hb_004375_050 Hb_000529_180 Hb_000529_180 Hb_000340_150--Hb_000529_180 Hb_001277_100 Hb_001277_100 Hb_000340_150--Hb_001277_100 Hb_000811_070 Hb_000811_070 Hb_000340_150--Hb_000811_070 Hb_002078_340 Hb_002078_340 Hb_000340_150--Hb_002078_340 Hb_003544_010 Hb_003544_010 Hb_005282_020--Hb_003544_010 Hb_000676_200 Hb_000676_200 Hb_005282_020--Hb_000676_200 Hb_000012_160 Hb_000012_160 Hb_005282_020--Hb_000012_160 Hb_005282_020--Hb_002685_060 Hb_000318_130 Hb_000318_130 Hb_005282_020--Hb_000318_130 Hb_003777_020 Hb_003777_020 Hb_002685_060--Hb_003777_020 Hb_002282_070 Hb_002282_070 Hb_002685_060--Hb_002282_070 Hb_016461_030 Hb_016461_030 Hb_002685_060--Hb_016461_030 Hb_007054_070 Hb_007054_070 Hb_002685_060--Hb_007054_070 Hb_000661_090 Hb_000661_090 Hb_002685_060--Hb_000661_090 Hb_005276_010 Hb_005276_010 Hb_002685_060--Hb_005276_010 Hb_000224_160 Hb_000224_160 Hb_001584_200--Hb_000224_160 Hb_001584_200--Hb_003376_230 Hb_012022_150 Hb_012022_150 Hb_001584_200--Hb_012022_150 Hb_002374_240 Hb_002374_240 Hb_001584_200--Hb_002374_240 Hb_001584_200--Hb_000172_580
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.8549 10.2727 40.4413 18.7991 27.3469 23.9453
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
41.6276 23.6435 47.1273 19.5906 97.93

CAGE analysis