Hb_002007_010

Information

Type -
Description -
Location Contig2007: 5262-8273
Sequence    

Annotation

kegg
ID tcc:TCM_026644
description Heat shock protein 70 (Hsp 70) family protein
nr
ID XP_012089020.1
description PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Jatropha curcas]
swissprot
ID Q9LKR3
description Mediator of RNA polymerase II transcription subunit 37a OS=Arabidopsis thaliana GN=MED37A PE=1 SV=1
trembl
ID A0A067JHR0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23319 PE=3 SV=1
Gene Ontology
ID GO:0005524
description luminal-binding protein 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002007_010 0.0 - - PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Jatropha curcas]
2 Hb_000649_100 0.352598212 - - unnamed protein product [Vitis vinifera]
3 Hb_032264_090 0.3597158596 - - hypothetical protein JCGZ_02512 [Jatropha curcas]
4 Hb_001103_020 0.3604721287 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
5 Hb_000210_090 0.3811059641 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Jatropha curcas]
6 Hb_140902_010 0.3894244865 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
7 Hb_001449_050 0.3918659068 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000191_010 0.3928220472 - - WD-repeat protein, putative [Ricinus communis]
9 Hb_002234_190 0.3993483016 - - PREDICTED: putative non-specific lipid-transfer protein 14 [Jatropha curcas]
10 Hb_006237_020 0.3999857493 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
11 Hb_000732_250 0.400252364 - - PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial-like [Populus euphratica]
12 Hb_006502_050 0.4007062735 - - -
13 Hb_000277_060 0.4027269198 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
14 Hb_000008_110 0.4041390956 - - PREDICTED: calcium-transporting ATPase 1, endoplasmic reticulum-type-like [Gossypium raimondii]
15 Hb_001268_390 0.4048560615 - - PREDICTED: uncharacterized protein LOC105108367 isoform X1 [Populus euphratica]
16 Hb_000256_060 0.4072531493 - - PREDICTED: zinc finger protein 3 [Jatropha curcas]
17 Hb_108886_010 0.4084169448 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_022132_040 0.4102634744 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
19 Hb_000108_170 0.4109344138 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Jatropha curcas]
20 Hb_165026_020 0.4110846616 transcription factor TF Family: NAC hypothetical protein POPTR_0014s10300g [Populus trichocarpa]

Gene co-expression network

sample Hb_002007_010 Hb_002007_010 Hb_000649_100 Hb_000649_100 Hb_002007_010--Hb_000649_100 Hb_032264_090 Hb_032264_090 Hb_002007_010--Hb_032264_090 Hb_001103_020 Hb_001103_020 Hb_002007_010--Hb_001103_020 Hb_000210_090 Hb_000210_090 Hb_002007_010--Hb_000210_090 Hb_140902_010 Hb_140902_010 Hb_002007_010--Hb_140902_010 Hb_001449_050 Hb_001449_050 Hb_002007_010--Hb_001449_050 Hb_009732_030 Hb_009732_030 Hb_000649_100--Hb_009732_030 Hb_001208_010 Hb_001208_010 Hb_000649_100--Hb_001208_010 Hb_002835_430 Hb_002835_430 Hb_000649_100--Hb_002835_430 Hb_000920_370 Hb_000920_370 Hb_000649_100--Hb_000920_370 Hb_000649_100--Hb_140902_010 Hb_002228_060 Hb_002228_060 Hb_000649_100--Hb_002228_060 Hb_000008_110 Hb_000008_110 Hb_032264_090--Hb_000008_110 Hb_032264_090--Hb_000210_090 Hb_002110_240 Hb_002110_240 Hb_032264_090--Hb_002110_240 Hb_008173_030 Hb_008173_030 Hb_032264_090--Hb_008173_030 Hb_000638_210 Hb_000638_210 Hb_032264_090--Hb_000638_210 Hb_000672_150 Hb_000672_150 Hb_032264_090--Hb_000672_150 Hb_003442_100 Hb_003442_100 Hb_001103_020--Hb_003442_100 Hb_006446_010 Hb_006446_010 Hb_001103_020--Hb_006446_010 Hb_000126_110 Hb_000126_110 Hb_001103_020--Hb_000126_110 Hb_111051_010 Hb_111051_010 Hb_001103_020--Hb_111051_010 Hb_011512_130 Hb_011512_130 Hb_001103_020--Hb_011512_130 Hb_001189_110 Hb_001189_110 Hb_001103_020--Hb_001189_110 Hb_000210_090--Hb_000638_210 Hb_007379_020 Hb_007379_020 Hb_000210_090--Hb_007379_020 Hb_003078_050 Hb_003078_050 Hb_000210_090--Hb_003078_050 Hb_002026_060 Hb_002026_060 Hb_000210_090--Hb_002026_060 Hb_005656_140 Hb_005656_140 Hb_000210_090--Hb_005656_140 Hb_002739_030 Hb_002739_030 Hb_140902_010--Hb_002739_030 Hb_140902_010--Hb_002835_430 Hb_014613_010 Hb_014613_010 Hb_140902_010--Hb_014613_010 Hb_000802_110 Hb_000802_110 Hb_140902_010--Hb_000802_110 Hb_001123_240 Hb_001123_240 Hb_140902_010--Hb_001123_240 Hb_000343_180 Hb_000343_180 Hb_001449_050--Hb_000343_180 Hb_012052_070 Hb_012052_070 Hb_001449_050--Hb_012052_070 Hb_089160_010 Hb_089160_010 Hb_001449_050--Hb_089160_010 Hb_005147_010 Hb_005147_010 Hb_001449_050--Hb_005147_010 Hb_140049_010 Hb_140049_010 Hb_001449_050--Hb_140049_010 Hb_023344_080 Hb_023344_080 Hb_001449_050--Hb_023344_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0966627 0 0.0352202 0 0.0351396
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0542548 0 0.0805514 0.017012 0

CAGE analysis