Hb_009732_030

Information

Type -
Description -
Location Contig9732: 66797-67133
Sequence    

Annotation

kegg
ID osa:4343660
description Os07g0570500
nr
ID DAA63221.1
description TPA: hypothetical protein ZEAMMB73_114254 [Zea mays]
swissprot
ID -
description -
trembl
ID A0A096PID1
description Uncharacterized protein OS=Zea mays PE=4 SV=1
Gene Ontology
ID GO:0003824
description zinc- peroxisomal-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63975: 44449-67254
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009732_030 0.0 - - TPA: hypothetical protein ZEAMMB73_114254 [Zea mays]
2 Hb_001208_010 0.2689222981 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF010-like [Jatropha curcas]
3 Hb_000649_100 0.3064836256 - - unnamed protein product [Vitis vinifera]
4 Hb_067793_010 0.3527663918 - - PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]
5 Hb_002228_060 0.3540150659 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
6 Hb_000042_220 0.3544710725 - - PREDICTED: uncharacterized protein LOC105632809 [Jatropha curcas]
7 Hb_001549_030 0.3665672701 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
8 Hb_001504_140 0.372831215 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
9 Hb_001124_220 0.3741757731 - - DsRNA-binding protein 5, putative isoform 1 [Theobroma cacao]
10 Hb_000166_060 0.3742807406 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000069_770 0.3770294489 - - translation initiation factor [Rheum australe]
12 Hb_032717_070 0.3781628553 - - PREDICTED: mucin-2-like [Jatropha curcas]
13 Hb_011472_010 0.37899472 - - PREDICTED: protein yippee-like [Jatropha curcas]
14 Hb_007120_040 0.3896308308 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003777_170 0.389974847 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003333_050 0.393836491 - - hypothetical protein JCGZ_20906 [Jatropha curcas]
17 Hb_033555_020 0.3948104095 - - Uncharacterized protein TCM_003129 [Theobroma cacao]
18 Hb_000008_180 0.3987757017 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000450_150 0.3995882845 - - Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]
20 Hb_000098_320 0.4048327795 - - -

Gene co-expression network

sample Hb_009732_030 Hb_009732_030 Hb_001208_010 Hb_001208_010 Hb_009732_030--Hb_001208_010 Hb_000649_100 Hb_000649_100 Hb_009732_030--Hb_000649_100 Hb_067793_010 Hb_067793_010 Hb_009732_030--Hb_067793_010 Hb_002228_060 Hb_002228_060 Hb_009732_030--Hb_002228_060 Hb_000042_220 Hb_000042_220 Hb_009732_030--Hb_000042_220 Hb_001549_030 Hb_001549_030 Hb_009732_030--Hb_001549_030 Hb_001208_010--Hb_067793_010 Hb_001124_220 Hb_001124_220 Hb_001208_010--Hb_001124_220 Hb_011472_010 Hb_011472_010 Hb_001208_010--Hb_011472_010 Hb_000920_370 Hb_000920_370 Hb_001208_010--Hb_000920_370 Hb_001208_010--Hb_000649_100 Hb_002835_430 Hb_002835_430 Hb_000649_100--Hb_002835_430 Hb_000649_100--Hb_000920_370 Hb_140902_010 Hb_140902_010 Hb_000649_100--Hb_140902_010 Hb_000649_100--Hb_002228_060 Hb_003032_100 Hb_003032_100 Hb_067793_010--Hb_003032_100 Hb_000010_410 Hb_000010_410 Hb_067793_010--Hb_000010_410 Hb_005671_020 Hb_005671_020 Hb_067793_010--Hb_005671_020 Hb_003333_050 Hb_003333_050 Hb_067793_010--Hb_003333_050 Hb_002272_280 Hb_002272_280 Hb_067793_010--Hb_002272_280 Hb_024154_020 Hb_024154_020 Hb_002228_060--Hb_024154_020 Hb_002893_160 Hb_002893_160 Hb_002228_060--Hb_002893_160 Hb_010896_020 Hb_010896_020 Hb_002228_060--Hb_010896_020 Hb_000510_020 Hb_000510_020 Hb_002228_060--Hb_000510_020 Hb_144451_010 Hb_144451_010 Hb_002228_060--Hb_144451_010 Hb_001504_140 Hb_001504_140 Hb_000042_220--Hb_001504_140 Hb_000042_220--Hb_011472_010 Hb_000042_220--Hb_002835_430 Hb_001712_040 Hb_001712_040 Hb_000042_220--Hb_001712_040 Hb_144484_010 Hb_144484_010 Hb_000042_220--Hb_144484_010 Hb_007672_030 Hb_007672_030 Hb_000042_220--Hb_007672_030 Hb_092995_020 Hb_092995_020 Hb_001549_030--Hb_092995_020 Hb_007125_010 Hb_007125_010 Hb_001549_030--Hb_007125_010 Hb_002184_100 Hb_002184_100 Hb_001549_030--Hb_002184_100 Hb_001242_010 Hb_001242_010 Hb_001549_030--Hb_001242_010 Hb_121461_020 Hb_121461_020 Hb_001549_030--Hb_121461_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 1.49091 0.294923 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.26844 0 2.55438 1.18138 0

CAGE analysis