Hb_067793_010

Information

Type -
Description -
Location Contig67793: 18-485
Sequence    

Annotation

kegg
ID sly:101260689
description uncharacterized LOC101260689
nr
ID XP_009620835.1
description PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC105631113

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_067793_010 0.0 - - PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]
2 Hb_003032_100 0.2271326182 - - PREDICTED: GDP-mannose transporter GONST4 [Jatropha curcas]
3 Hb_000010_410 0.2347213982 - - hypothetical protein POPTR_0015s10070g, partial [Populus trichocarpa]
4 Hb_005671_020 0.2352417535 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
5 Hb_003333_050 0.2439144047 - - hypothetical protein JCGZ_20906 [Jatropha curcas]
6 Hb_002272_280 0.2538462334 - - phosphoglycerate mutase, putative [Ricinus communis]
7 Hb_001208_010 0.2548299235 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF010-like [Jatropha curcas]
8 Hb_001712_040 0.2566643777 - - Calmodulin, putative [Ricinus communis]
9 Hb_001053_150 0.2608185395 - - -
10 Hb_002078_480 0.2719852739 - - hypothetical protein CICLE_v10033318mg [Citrus clementina]
11 Hb_003680_190 0.2737979989 - - hypothetical protein POPTR_0006s11880g [Populus trichocarpa]
12 Hb_000297_040 0.2748339249 - - pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus communis]
13 Hb_001124_220 0.2749517377 - - DsRNA-binding protein 5, putative isoform 1 [Theobroma cacao]
14 Hb_000690_050 0.2763068786 - - -
15 Hb_011472_010 0.2836450378 - - PREDICTED: protein yippee-like [Jatropha curcas]
16 Hb_001504_140 0.2911882909 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
17 Hb_000042_220 0.2913264361 - - PREDICTED: uncharacterized protein LOC105632809 [Jatropha curcas]
18 Hb_002194_090 0.292048783 - - nucleic acid binding protein, putative [Ricinus communis]
19 Hb_001516_020 0.2945448946 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-9-like isoform X2 [Jatropha curcas]
20 Hb_012163_020 0.2948780956 - - PREDICTED: uncharacterized protein LOC105650815 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_067793_010 Hb_067793_010 Hb_003032_100 Hb_003032_100 Hb_067793_010--Hb_003032_100 Hb_000010_410 Hb_000010_410 Hb_067793_010--Hb_000010_410 Hb_005671_020 Hb_005671_020 Hb_067793_010--Hb_005671_020 Hb_003333_050 Hb_003333_050 Hb_067793_010--Hb_003333_050 Hb_002272_280 Hb_002272_280 Hb_067793_010--Hb_002272_280 Hb_001208_010 Hb_001208_010 Hb_067793_010--Hb_001208_010 Hb_003032_100--Hb_005671_020 Hb_002067_100 Hb_002067_100 Hb_003032_100--Hb_002067_100 Hb_000161_150 Hb_000161_150 Hb_003032_100--Hb_000161_150 Hb_003913_080 Hb_003913_080 Hb_003032_100--Hb_003913_080 Hb_000227_200 Hb_000227_200 Hb_003032_100--Hb_000227_200 Hb_000172_570 Hb_000172_570 Hb_003032_100--Hb_000172_570 Hb_001053_150 Hb_001053_150 Hb_000010_410--Hb_001053_150 Hb_002239_060 Hb_002239_060 Hb_000010_410--Hb_002239_060 Hb_005060_020 Hb_005060_020 Hb_000010_410--Hb_005060_020 Hb_005224_010 Hb_005224_010 Hb_000010_410--Hb_005224_010 Hb_005489_100 Hb_005489_100 Hb_000010_410--Hb_005489_100 Hb_001222_050 Hb_001222_050 Hb_000010_410--Hb_001222_050 Hb_001096_030 Hb_001096_030 Hb_005671_020--Hb_001096_030 Hb_005671_020--Hb_000161_150 Hb_000723_190 Hb_000723_190 Hb_005671_020--Hb_000723_190 Hb_005671_020--Hb_000010_410 Hb_001232_140 Hb_001232_140 Hb_005671_020--Hb_001232_140 Hb_003333_050--Hb_001222_050 Hb_003333_050--Hb_000010_410 Hb_001277_090 Hb_001277_090 Hb_003333_050--Hb_001277_090 Hb_000130_110 Hb_000130_110 Hb_003333_050--Hb_000130_110 Hb_003333_050--Hb_005224_010 Hb_011316_020 Hb_011316_020 Hb_003333_050--Hb_011316_020 Hb_009646_040 Hb_009646_040 Hb_002272_280--Hb_009646_040 Hb_011377_050 Hb_011377_050 Hb_002272_280--Hb_011377_050 Hb_000019_070 Hb_000019_070 Hb_002272_280--Hb_000019_070 Hb_000638_170 Hb_000638_170 Hb_002272_280--Hb_000638_170 Hb_000161_060 Hb_000161_060 Hb_002272_280--Hb_000161_060 Hb_000521_130 Hb_000521_130 Hb_002272_280--Hb_000521_130 Hb_001124_220 Hb_001124_220 Hb_001208_010--Hb_001124_220 Hb_009732_030 Hb_009732_030 Hb_001208_010--Hb_009732_030 Hb_011472_010 Hb_011472_010 Hb_001208_010--Hb_011472_010 Hb_000920_370 Hb_000920_370 Hb_001208_010--Hb_000920_370 Hb_000649_100 Hb_000649_100 Hb_001208_010--Hb_000649_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0922478 0 0 0.566715 0.0935106 0.0844272
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.219209 0.344403 1.08504 0.223673 0

CAGE analysis