Hb_000019_070

Information

Type -
Description -
Location Contig19: 38933-43918
Sequence    

Annotation

kegg
ID rcu:RCOM_1445520
description phosphoglycerate mutase, putative
nr
ID XP_012067337.1
description PREDICTED: uncharacterized protein LOC105630200 [Jatropha curcas]
swissprot
ID B1WAX6
description Fructose-2,6-bisphosphatase TIGAR OS=Xenopus tropicalis GN=tigar PE=2 SV=1
trembl
ID A0A067L3P9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26861 PE=4 SV=1
Gene Ontology
ID GO:0005634
description phosphoglycerate bisphosphoglycerate mutase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18873: 42797-43223
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000019_070 0.0 - - PREDICTED: uncharacterized protein LOC105630200 [Jatropha curcas]
2 Hb_003207_170 0.0896184262 - - PREDICTED: calcium-dependent protein kinase 26 isoform X1 [Jatropha curcas]
3 Hb_114310_080 0.0973111279 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000483_390 0.1025903939 - - PREDICTED: vesicle-associated protein 2-1 [Jatropha curcas]
5 Hb_011377_050 0.1035224348 - - PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X1 [Jatropha curcas]
6 Hb_000392_380 0.1039189887 - - ubiquitin-conjugating enzyme [Medicago truncatula]
7 Hb_003671_020 0.1078822483 - - calcineurin B, putative [Ricinus communis]
8 Hb_000748_130 0.1129652674 - - PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Jatropha curcas]
9 Hb_000638_170 0.1132617349 - - PREDICTED: ras-related protein RABC1 [Jatropha curcas]
10 Hb_028515_010 0.1142346973 - - PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X1 [Jatropha curcas]
11 Hb_029388_030 0.1144834211 - - PREDICTED: uncharacterized protein LOC105647324 [Jatropha curcas]
12 Hb_000985_060 0.1157328977 - - PREDICTED: protein transport protein SFT2-like isoform X1 [Jatropha curcas]
13 Hb_009486_020 0.1159416291 - - nucleoside diphosphate kinase 1 [Hevea brasiliensis]
14 Hb_012760_070 0.1189944152 - - protein phosphatase 2c, putative [Ricinus communis]
15 Hb_000161_060 0.1211687348 - - PREDICTED: probable magnesium transporter NIPA4 [Jatropha curcas]
16 Hb_000125_100 0.1212143945 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105635070 [Jatropha curcas]
17 Hb_000120_020 0.1225316256 - - PREDICTED: inositol 3-kinase [Jatropha curcas]
18 Hb_000629_120 0.1237047837 - - Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Theobroma cacao]
19 Hb_148113_010 0.1239578708 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17C-like isoform X3 [Citrus sinensis]
20 Hb_003414_050 0.1246614008 - - PREDICTED: uncharacterized protein LOC105640180 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_000019_070 Hb_000019_070 Hb_003207_170 Hb_003207_170 Hb_000019_070--Hb_003207_170 Hb_114310_080 Hb_114310_080 Hb_000019_070--Hb_114310_080 Hb_000483_390 Hb_000483_390 Hb_000019_070--Hb_000483_390 Hb_011377_050 Hb_011377_050 Hb_000019_070--Hb_011377_050 Hb_000392_380 Hb_000392_380 Hb_000019_070--Hb_000392_380 Hb_003671_020 Hb_003671_020 Hb_000019_070--Hb_003671_020 Hb_001153_060 Hb_001153_060 Hb_003207_170--Hb_001153_060 Hb_000373_130 Hb_000373_130 Hb_003207_170--Hb_000373_130 Hb_000567_120 Hb_000567_120 Hb_003207_170--Hb_000567_120 Hb_000985_060 Hb_000985_060 Hb_003207_170--Hb_000985_060 Hb_027625_010 Hb_027625_010 Hb_003207_170--Hb_027625_010 Hb_114310_080--Hb_000985_060 Hb_028515_010 Hb_028515_010 Hb_114310_080--Hb_028515_010 Hb_029388_030 Hb_029388_030 Hb_114310_080--Hb_029388_030 Hb_114310_080--Hb_000483_390 Hb_000417_260 Hb_000417_260 Hb_114310_080--Hb_000417_260 Hb_001461_010 Hb_001461_010 Hb_114310_080--Hb_001461_010 Hb_003414_050 Hb_003414_050 Hb_000483_390--Hb_003414_050 Hb_000638_170 Hb_000638_170 Hb_000483_390--Hb_000638_170 Hb_011381_080 Hb_011381_080 Hb_000483_390--Hb_011381_080 Hb_000483_390--Hb_003671_020 Hb_000483_390--Hb_028515_010 Hb_011377_050--Hb_000483_390 Hb_011377_050--Hb_114310_080 Hb_000140_050 Hb_000140_050 Hb_011377_050--Hb_000140_050 Hb_006472_050 Hb_006472_050 Hb_011377_050--Hb_006472_050 Hb_003540_030 Hb_003540_030 Hb_011377_050--Hb_003540_030 Hb_000392_380--Hb_114310_080 Hb_000115_230 Hb_000115_230 Hb_000392_380--Hb_000115_230 Hb_001172_120 Hb_001172_120 Hb_000392_380--Hb_001172_120 Hb_000392_380--Hb_029388_030 Hb_007192_100 Hb_007192_100 Hb_000392_380--Hb_007192_100 Hb_000125_100 Hb_000125_100 Hb_003671_020--Hb_000125_100 Hb_003671_020--Hb_003414_050 Hb_003671_020--Hb_029388_030 Hb_002375_070 Hb_002375_070 Hb_003671_020--Hb_002375_070 Hb_009615_070 Hb_009615_070 Hb_003671_020--Hb_009615_070 Hb_000479_190 Hb_000479_190 Hb_003671_020--Hb_000479_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.53715 4.0058 2.17191 9.41233 2.96017 4.83158
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.96141 15.214 16.8067 3.80328 2.69399

CAGE analysis