Hb_002006_010

Information

Type -
Description -
Location Contig2006: 7610-9475
Sequence    

Annotation

kegg
ID tcc:TCM_012242
description Adenine nucleotide alpha hydrolases-like superfamily protein isoform 2
nr
ID XP_007036415.1
description Adenine nucleotide alpha hydrolases-like superfamily protein, putative isoform 1 [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061FUI3
description Adenine nucleotide alpha hydrolases-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_012242 PE=4 SV=1
Gene Ontology
ID GO:0006950
description adenine nucleotide alpha hydrolases-like superfamily protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002006_010 0.0 - - Adenine nucleotide alpha hydrolases-like superfamily protein, putative isoform 1 [Theobroma cacao]
2 Hb_000080_070 0.1649061381 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
3 Hb_005015_100 0.1752765749 - - PREDICTED: uncharacterized protein LOC105636541 isoform X1 [Jatropha curcas]
4 Hb_000268_060 0.1767231497 - - receptor protein kinase, putative [Ricinus communis]
5 Hb_002215_030 0.1771400976 - - PREDICTED: uncharacterized protein LOC105640840 isoform X1 [Jatropha curcas]
6 Hb_007262_010 0.1845237946 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X2 [Jatropha curcas]
7 Hb_000836_620 0.1845322715 - - PREDICTED: protochlorophyllide reductase, chloroplastic [Jatropha curcas]
8 Hb_001377_080 0.1857593202 - - PREDICTED: uncharacterized protein LOC105642864 [Jatropha curcas]
9 Hb_004218_060 0.1862745041 - - annexin [Manihot esculenta]
10 Hb_001638_060 0.1888661972 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
11 Hb_001287_020 0.1893410828 - - SulA [Manihot esculenta]
12 Hb_003683_170 0.189551193 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000768_120 0.1916292576 - - PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
14 Hb_003750_110 0.1920662641 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
15 Hb_000210_210 0.1925965477 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
16 Hb_000210_020 0.1929731077 transcription factor TF Family: OFP Ovate family protein 13, putative [Theobroma cacao]
17 Hb_000030_070 0.1933296448 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000635_240 0.1944019124 - - chlorophyll a/b-binding protein type II precursor [Populus trichocarpa]
19 Hb_007317_170 0.194424616 - - PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]
20 Hb_000414_040 0.1949298078 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]

Gene co-expression network

sample Hb_002006_010 Hb_002006_010 Hb_000080_070 Hb_000080_070 Hb_002006_010--Hb_000080_070 Hb_005015_100 Hb_005015_100 Hb_002006_010--Hb_005015_100 Hb_000268_060 Hb_000268_060 Hb_002006_010--Hb_000268_060 Hb_002215_030 Hb_002215_030 Hb_002006_010--Hb_002215_030 Hb_007262_010 Hb_007262_010 Hb_002006_010--Hb_007262_010 Hb_000836_620 Hb_000836_620 Hb_002006_010--Hb_000836_620 Hb_003750_110 Hb_003750_110 Hb_000080_070--Hb_003750_110 Hb_001287_020 Hb_001287_020 Hb_000080_070--Hb_001287_020 Hb_000080_070--Hb_000836_620 Hb_001638_060 Hb_001638_060 Hb_000080_070--Hb_001638_060 Hb_000142_050 Hb_000142_050 Hb_000080_070--Hb_000142_050 Hb_003683_170 Hb_003683_170 Hb_000080_070--Hb_003683_170 Hb_005015_100--Hb_002215_030 Hb_020648_030 Hb_020648_030 Hb_005015_100--Hb_020648_030 Hb_005015_100--Hb_001287_020 Hb_000510_180 Hb_000510_180 Hb_005015_100--Hb_000510_180 Hb_001717_060 Hb_001717_060 Hb_005015_100--Hb_001717_060 Hb_000648_070 Hb_000648_070 Hb_005015_100--Hb_000648_070 Hb_000268_060--Hb_000080_070 Hb_000268_060--Hb_003750_110 Hb_028227_060 Hb_028227_060 Hb_000268_060--Hb_028227_060 Hb_000268_060--Hb_000836_620 Hb_005460_040 Hb_005460_040 Hb_000268_060--Hb_005460_040 Hb_011930_190 Hb_011930_190 Hb_000268_060--Hb_011930_190 Hb_002215_030--Hb_001287_020 Hb_002215_030--Hb_020648_030 Hb_008013_020 Hb_008013_020 Hb_002215_030--Hb_008013_020 Hb_000977_250 Hb_000977_250 Hb_002215_030--Hb_000977_250 Hb_005618_030 Hb_005618_030 Hb_002215_030--Hb_005618_030 Hb_145188_010 Hb_145188_010 Hb_007262_010--Hb_145188_010 Hb_007262_010--Hb_003750_110 Hb_004218_060 Hb_004218_060 Hb_007262_010--Hb_004218_060 Hb_007262_010--Hb_000836_620 Hb_000362_080 Hb_000362_080 Hb_007262_010--Hb_000362_080 Hb_005736_120 Hb_005736_120 Hb_007262_010--Hb_005736_120 Hb_000836_620--Hb_003750_110 Hb_002929_030 Hb_002929_030 Hb_000836_620--Hb_002929_030 Hb_001433_210 Hb_001433_210 Hb_000836_620--Hb_001433_210 Hb_000635_240 Hb_000635_240 Hb_000836_620--Hb_000635_240 Hb_000210_210 Hb_000210_210 Hb_000836_620--Hb_000210_210 Hb_000836_620--Hb_000142_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.64515 0.248539 0.1026 0.0969372
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0415285 1.13137

CAGE analysis