Hb_001257_090

Information

Type -
Description -
Location Contig1257: 142600-143070
Sequence    

Annotation

kegg
ID cit:102617255
description uncharacterized LOC102617255
nr
ID XP_012080215.1
description PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9T0J0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0301860 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001257_090 0.0 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
2 Hb_051017_010 0.2743176503 - - Uncharacterized protein TCM_031047 [Theobroma cacao]
3 Hb_010068_060 0.2757349263 - - protein translation factor SUI1 homolog 2 [Jatropha curcas]
4 Hb_111876_010 0.2824173419 - - Auxin response factor, putative [Ricinus communis]
5 Hb_007137_060 0.2828460959 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]
6 Hb_000152_220 0.2911976565 - - acc synthase, putative [Ricinus communis]
7 Hb_001442_030 0.2983540488 - - Peroxisome biogenesis factor [Medicago truncatula]
8 Hb_001318_200 0.3083059682 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
9 Hb_001102_260 0.3085274108 - - hypothetical protein L484_019841 [Morus notabilis]
10 Hb_002039_050 0.3099789531 - - PREDICTED: U-box domain-containing protein 40 [Jatropha curcas]
11 Hb_028486_060 0.3127153512 - - PREDICTED: putative germin-like protein 9-2 [Jatropha curcas]
12 Hb_095831_010 0.314873184 - - PREDICTED: uncharacterized protein LOC104884649 [Beta vulgaris subsp. vulgaris]
13 Hb_000566_080 0.3161597644 - - -
14 Hb_000421_130 0.3165832091 transcription factor TF Family: C2C2-Dof zinc finger protein, putative [Ricinus communis]
15 Hb_001247_170 0.3182949054 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
16 Hb_086022_010 0.3188715059 - - PREDICTED: succinate dehydrogenase assembly factor 1 homolog, mitochondrial [Nicotiana tomentosiformis]
17 Hb_004994_340 0.3191203369 - - -
18 Hb_003371_060 0.320660601 - - PREDICTED: cyclic pyranopterin monophosphate synthase, mitochondrial isoform X3 [Populus euphratica]
19 Hb_004374_130 0.3208706377 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
20 Hb_002687_040 0.3217399428 - - PREDICTED: alpha-galactosidase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001257_090 Hb_001257_090 Hb_051017_010 Hb_051017_010 Hb_001257_090--Hb_051017_010 Hb_010068_060 Hb_010068_060 Hb_001257_090--Hb_010068_060 Hb_111876_010 Hb_111876_010 Hb_001257_090--Hb_111876_010 Hb_007137_060 Hb_007137_060 Hb_001257_090--Hb_007137_060 Hb_000152_220 Hb_000152_220 Hb_001257_090--Hb_000152_220 Hb_001442_030 Hb_001442_030 Hb_001257_090--Hb_001442_030 Hb_005928_080 Hb_005928_080 Hb_051017_010--Hb_005928_080 Hb_002582_070 Hb_002582_070 Hb_051017_010--Hb_002582_070 Hb_001247_170 Hb_001247_170 Hb_051017_010--Hb_001247_170 Hb_184134_010 Hb_184134_010 Hb_051017_010--Hb_184134_010 Hb_005271_020 Hb_005271_020 Hb_051017_010--Hb_005271_020 Hb_003580_030 Hb_003580_030 Hb_051017_010--Hb_003580_030 Hb_098315_070 Hb_098315_070 Hb_010068_060--Hb_098315_070 Hb_032202_170 Hb_032202_170 Hb_010068_060--Hb_032202_170 Hb_004635_130 Hb_004635_130 Hb_010068_060--Hb_004635_130 Hb_000163_240 Hb_000163_240 Hb_010068_060--Hb_000163_240 Hb_000008_230 Hb_000008_230 Hb_010068_060--Hb_000008_230 Hb_002344_090 Hb_002344_090 Hb_010068_060--Hb_002344_090 Hb_000122_060 Hb_000122_060 Hb_111876_010--Hb_000122_060 Hb_002039_050 Hb_002039_050 Hb_111876_010--Hb_002039_050 Hb_000035_310 Hb_000035_310 Hb_111876_010--Hb_000035_310 Hb_125948_010 Hb_125948_010 Hb_111876_010--Hb_125948_010 Hb_004374_130 Hb_004374_130 Hb_111876_010--Hb_004374_130 Hb_000979_010 Hb_000979_010 Hb_111876_010--Hb_000979_010 Hb_007137_060--Hb_001442_030 Hb_002235_120 Hb_002235_120 Hb_007137_060--Hb_002235_120 Hb_077211_010 Hb_077211_010 Hb_007137_060--Hb_077211_010 Hb_004994_340 Hb_004994_340 Hb_007137_060--Hb_004994_340 Hb_130134_030 Hb_130134_030 Hb_007137_060--Hb_130134_030 Hb_020805_010 Hb_020805_010 Hb_007137_060--Hb_020805_010 Hb_000850_040 Hb_000850_040 Hb_000152_220--Hb_000850_040 Hb_183557_010 Hb_183557_010 Hb_000152_220--Hb_183557_010 Hb_003925_070 Hb_003925_070 Hb_000152_220--Hb_003925_070 Hb_007441_050 Hb_007441_050 Hb_000152_220--Hb_007441_050 Hb_106411_010 Hb_106411_010 Hb_000152_220--Hb_106411_010 Hb_001752_040 Hb_001752_040 Hb_000152_220--Hb_001752_040 Hb_002320_070 Hb_002320_070 Hb_001442_030--Hb_002320_070 Hb_126295_010 Hb_126295_010 Hb_001442_030--Hb_126295_010 Hb_076874_010 Hb_076874_010 Hb_001442_030--Hb_076874_010 Hb_073973_160 Hb_073973_160 Hb_001442_030--Hb_073973_160 Hb_058551_010 Hb_058551_010 Hb_001442_030--Hb_058551_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.063154 0.108877 0.254337 0.396193 0.539284 0.2844
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.116514 0.194841 0 0

CAGE analysis