Hb_001252_200

Information

Type -
Description -
Location Contig1252: 276081-276797
Sequence    

Annotation

kegg
ID rcu:RCOM_1469290
description hypothetical protein
nr
ID XP_012080407.1
description PREDICTED: uncharacterized protein LOC105640649 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KHP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11745 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001252_200 0.0 - - PREDICTED: uncharacterized protein LOC105640649 [Jatropha curcas]
2 Hb_001005_150 0.1418362917 - - -
3 Hb_106415_010 0.1560815045 - - PREDICTED: snRNA-activating protein complex subunit isoform X1 [Jatropha curcas]
4 Hb_007083_020 0.1759907193 - - hypothetical protein F775_15403 [Aegilops tauschii]
5 Hb_051424_010 0.1821358433 - - PREDICTED: putative methyltransferase At1g22800 [Jatropha curcas]
6 Hb_013691_010 0.1838604158 - - PREDICTED: uncharacterized protein LOC103724099, partial [Phoenix dactylifera]
7 Hb_000087_030 0.1946221787 - - hypothetical protein JCGZ_02243 [Jatropha curcas]
8 Hb_006663_090 0.1979068041 - - hypothetical protein B456_010G1255001, partial [Gossypium raimondii]
9 Hb_041025_010 0.2009048781 - - PREDICTED: uncharacterized protein LOC105635593 [Jatropha curcas]
10 Hb_033385_010 0.2013485615 - - hypothetical protein JCGZ_06094 [Jatropha curcas]
11 Hb_046120_010 0.2021227315 - - -
12 Hb_009119_020 0.2039926036 - - hypothetical protein CISIN_1g033708mg [Citrus sinensis]
13 Hb_001141_300 0.2066556934 - - -
14 Hb_051437_010 0.2087258893 - - PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]
15 Hb_010964_020 0.2098890972 - - RNA helicase [Arabidopsis thaliana]
16 Hb_181328_010 0.2106792947 - - PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_183522_010 0.2118052236 - - Far upstream element-binding protein, putative [Ricinus communis]
18 Hb_068014_010 0.211952724 - - hypothetical protein POPTR_0312s00200g, partial [Populus trichocarpa]
19 Hb_000130_190 0.213337593 - - PREDICTED: uncharacterized protein LOC105638437 [Jatropha curcas]
20 Hb_001623_300 0.2153979469 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Jatropha curcas]

Gene co-expression network

sample Hb_001252_200 Hb_001252_200 Hb_001005_150 Hb_001005_150 Hb_001252_200--Hb_001005_150 Hb_106415_010 Hb_106415_010 Hb_001252_200--Hb_106415_010 Hb_007083_020 Hb_007083_020 Hb_001252_200--Hb_007083_020 Hb_051424_010 Hb_051424_010 Hb_001252_200--Hb_051424_010 Hb_013691_010 Hb_013691_010 Hb_001252_200--Hb_013691_010 Hb_000087_030 Hb_000087_030 Hb_001252_200--Hb_000087_030 Hb_002411_130 Hb_002411_130 Hb_001005_150--Hb_002411_130 Hb_070469_010 Hb_070469_010 Hb_001005_150--Hb_070469_010 Hb_121467_010 Hb_121467_010 Hb_001005_150--Hb_121467_010 Hb_001005_150--Hb_051424_010 Hb_001005_150--Hb_000087_030 Hb_099878_050 Hb_099878_050 Hb_106415_010--Hb_099878_050 Hb_033385_010 Hb_033385_010 Hb_106415_010--Hb_033385_010 Hb_106415_010--Hb_007083_020 Hb_019053_010 Hb_019053_010 Hb_106415_010--Hb_019053_010 Hb_007333_040 Hb_007333_040 Hb_106415_010--Hb_007333_040 Hb_000825_030 Hb_000825_030 Hb_106415_010--Hb_000825_030 Hb_183522_010 Hb_183522_010 Hb_007083_020--Hb_183522_010 Hb_068014_010 Hb_068014_010 Hb_007083_020--Hb_068014_010 Hb_003371_170 Hb_003371_170 Hb_007083_020--Hb_003371_170 Hb_007083_020--Hb_019053_010 Hb_005542_090 Hb_005542_090 Hb_007083_020--Hb_005542_090 Hb_051437_010 Hb_051437_010 Hb_051424_010--Hb_051437_010 Hb_051424_010--Hb_106415_010 Hb_008029_020 Hb_008029_020 Hb_051424_010--Hb_008029_020 Hb_006663_090 Hb_006663_090 Hb_051424_010--Hb_006663_090 Hb_181328_010 Hb_181328_010 Hb_051424_010--Hb_181328_010 Hb_115477_010 Hb_115477_010 Hb_051424_010--Hb_115477_010 Hb_013691_010--Hb_006663_090 Hb_005679_070 Hb_005679_070 Hb_013691_010--Hb_005679_070 Hb_150023_010 Hb_150023_010 Hb_013691_010--Hb_150023_010 Hb_002084_010 Hb_002084_010 Hb_013691_010--Hb_002084_010 Hb_005085_030 Hb_005085_030 Hb_013691_010--Hb_005085_030 Hb_000051_170 Hb_000051_170 Hb_000087_030--Hb_000051_170 Hb_033363_070 Hb_033363_070 Hb_000087_030--Hb_033363_070 Hb_005714_130 Hb_005714_130 Hb_000087_030--Hb_005714_130 Hb_165279_010 Hb_165279_010 Hb_000087_030--Hb_165279_010 Hb_000130_190 Hb_000130_190 Hb_000087_030--Hb_000130_190 Hb_011671_090 Hb_011671_090 Hb_000087_030--Hb_011671_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.235008 0.318289 0.206494 1.26267 0.478249 2.25499
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.28033 0.220376 0 0.197692 0.362635

CAGE analysis