Hb_001005_150

Information

Type -
Description -
Location Contig1005: 152945-154061
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0005783
description disease resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00342: 152521-176632
cDNA
(Sanger)
(ID:Location)		 003_D07.ab1: 152532-154011 , 049_L12.ab1: 152532-153738

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001005_150 0.0 - - -
2 Hb_001252_200 0.1418362917 - - PREDICTED: uncharacterized protein LOC105640649 [Jatropha curcas]
3 Hb_002411_130 0.1673036822 - - PREDICTED: cytosolic sulfotransferase 15-like [Populus euphratica]
4 Hb_070469_010 0.1801766361 - - hypothetical protein POPTR_0002s21850g [Populus trichocarpa]
5 Hb_121467_010 0.182845349 - - tubulin-specific chaperone E, putative [Ricinus communis]
6 Hb_051424_010 0.1867084337 - - PREDICTED: putative methyltransferase At1g22800 [Jatropha curcas]
7 Hb_000087_030 0.1924648156 - - hypothetical protein JCGZ_02243 [Jatropha curcas]
8 Hb_004935_080 0.1961222304 - - AT3g13060/MGH6_17 [Arabidopsis thaliana]
9 Hb_000130_190 0.1985022263 - - PREDICTED: uncharacterized protein LOC105638437 [Jatropha curcas]
10 Hb_000159_110 0.1997283963 - - PREDICTED: thioredoxin-like protein YLS8 isoform X2 [Malus domestica]
11 Hb_088428_010 0.2020188801 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
12 Hb_009119_030 0.2032466116 - - GMFP4 [Medicago truncatula]
13 Hb_000302_160 0.2045509284 - - PREDICTED: uncharacterized protein LOC105648403 [Jatropha curcas]
14 Hb_000429_250 0.2078477778 - - hypothetical protein L484_000744 [Morus notabilis]
15 Hb_001767_120 0.2083011361 - - -
16 Hb_041025_010 0.2141556502 - - PREDICTED: uncharacterized protein LOC105635593 [Jatropha curcas]
17 Hb_027295_040 0.2149906674 - - hypothetical protein MIMGU_mgv1a017500mg [Erythranthe guttata]
18 Hb_106415_010 0.2168708933 - - PREDICTED: snRNA-activating protein complex subunit isoform X1 [Jatropha curcas]
19 Hb_002084_010 0.217967129 - - hypothetical protein VITISV_017990 [Vitis vinifera]
20 Hb_178620_010 0.217994038 - - ADP-ribosylation factor, arf, putative [Ricinus communis]

Gene co-expression network

sample Hb_001005_150 Hb_001005_150 Hb_001252_200 Hb_001252_200 Hb_001005_150--Hb_001252_200 Hb_002411_130 Hb_002411_130 Hb_001005_150--Hb_002411_130 Hb_070469_010 Hb_070469_010 Hb_001005_150--Hb_070469_010 Hb_121467_010 Hb_121467_010 Hb_001005_150--Hb_121467_010 Hb_051424_010 Hb_051424_010 Hb_001005_150--Hb_051424_010 Hb_000087_030 Hb_000087_030 Hb_001005_150--Hb_000087_030 Hb_106415_010 Hb_106415_010 Hb_001252_200--Hb_106415_010 Hb_007083_020 Hb_007083_020 Hb_001252_200--Hb_007083_020 Hb_001252_200--Hb_051424_010 Hb_013691_010 Hb_013691_010 Hb_001252_200--Hb_013691_010 Hb_001252_200--Hb_000087_030 Hb_000159_110 Hb_000159_110 Hb_002411_130--Hb_000159_110 Hb_001752_040 Hb_001752_040 Hb_002411_130--Hb_001752_040 Hb_009119_030 Hb_009119_030 Hb_002411_130--Hb_009119_030 Hb_002411_130--Hb_121467_010 Hb_003376_070 Hb_003376_070 Hb_002411_130--Hb_003376_070 Hb_001767_120 Hb_001767_120 Hb_002411_130--Hb_001767_120 Hb_004935_080 Hb_004935_080 Hb_070469_010--Hb_004935_080 Hb_076874_010 Hb_076874_010 Hb_070469_010--Hb_076874_010 Hb_162040_010 Hb_162040_010 Hb_070469_010--Hb_162040_010 Hb_126295_010 Hb_126295_010 Hb_070469_010--Hb_126295_010 Hb_003925_070 Hb_003925_070 Hb_070469_010--Hb_003925_070 Hb_070469_010--Hb_121467_010 Hb_088428_010 Hb_088428_010 Hb_121467_010--Hb_088428_010 Hb_121467_010--Hb_000159_110 Hb_121467_010--Hb_009119_030 Hb_121467_010--Hb_001767_120 Hb_051437_010 Hb_051437_010 Hb_051424_010--Hb_051437_010 Hb_051424_010--Hb_106415_010 Hb_008029_020 Hb_008029_020 Hb_051424_010--Hb_008029_020 Hb_006663_090 Hb_006663_090 Hb_051424_010--Hb_006663_090 Hb_181328_010 Hb_181328_010 Hb_051424_010--Hb_181328_010 Hb_115477_010 Hb_115477_010 Hb_051424_010--Hb_115477_010 Hb_000051_170 Hb_000051_170 Hb_000087_030--Hb_000051_170 Hb_033363_070 Hb_033363_070 Hb_000087_030--Hb_033363_070 Hb_005714_130 Hb_005714_130 Hb_000087_030--Hb_005714_130 Hb_165279_010 Hb_165279_010 Hb_000087_030--Hb_165279_010 Hb_000130_190 Hb_000130_190 Hb_000087_030--Hb_000130_190 Hb_011671_090 Hb_011671_090 Hb_000087_030--Hb_011671_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.839312 1.10242 1.61915 2.8237 2.10278 6.21675
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.682268 0.750382 0 0.267637 0.799799

CAGE analysis