Hb_001221_290

Information

Type -
Description -
Location Contig1221: 215043-216296
Sequence    

Annotation

kegg
ID rcu:RCOM_1506010
description hypothetical protein
nr
ID XP_002511177.1
description hypothetical protein RCOM_1506010 [Ricinus communis]
swissprot
ID Q9N0E7
description Molybdenum cofactor sulfurase OS=Bos taurus GN=MOCOS PE=2 SV=3
trembl
ID B9RAF2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506010 PE=4 SV=1
Gene Ontology
ID GO:0016740
description pyridoxal phosphate-dependent transferases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_290 0.0 - - hypothetical protein RCOM_1506010 [Ricinus communis]
2 Hb_000365_280 0.1392228186 - - calcium binding protein/cast, putative [Ricinus communis]
3 Hb_003001_130 0.1508431363 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002173_030 0.1517539546 - - hypothetical protein JCGZ_12466 [Jatropha curcas]
5 Hb_000479_060 0.1535007771 - - PREDICTED: UDP-glucose 6-dehydrogenase 1 [Vitis vinifera]
6 Hb_003387_050 0.1543722635 - - PREDICTED: uncharacterized protein LOC105639324 [Jatropha curcas]
7 Hb_003929_230 0.164181951 - - PREDICTED: S-adenosylmethionine synthase 5 [Nelumbo nucifera]
8 Hb_005054_020 0.1664205577 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Jatropha curcas]
9 Hb_000603_020 0.1721602479 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
10 Hb_000320_350 0.1736261999 - - hypothetical protein RCOM_0904330 [Ricinus communis]
11 Hb_000109_190 0.1768458131 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
12 Hb_004449_090 0.1771665022 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
13 Hb_002973_030 0.1796224952 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
14 Hb_000028_580 0.1801872969 - - PREDICTED: glutamate decarboxylase 5-like [Jatropha curcas]
15 Hb_000928_120 0.1803556522 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
16 Hb_000028_430 0.1830178035 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
17 Hb_005489_150 0.1857458608 - - hypothetical protein JCGZ_20759 [Jatropha curcas]
18 Hb_000692_230 0.1871746422 - - phospholipase d delta, putative [Ricinus communis]
19 Hb_003849_190 0.1879287223 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
20 Hb_001439_250 0.188618634 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]

Gene co-expression network

sample Hb_001221_290 Hb_001221_290 Hb_000365_280 Hb_000365_280 Hb_001221_290--Hb_000365_280 Hb_003001_130 Hb_003001_130 Hb_001221_290--Hb_003001_130 Hb_002173_030 Hb_002173_030 Hb_001221_290--Hb_002173_030 Hb_000479_060 Hb_000479_060 Hb_001221_290--Hb_000479_060 Hb_003387_050 Hb_003387_050 Hb_001221_290--Hb_003387_050 Hb_003929_230 Hb_003929_230 Hb_001221_290--Hb_003929_230 Hb_000365_280--Hb_000479_060 Hb_004007_070 Hb_004007_070 Hb_000365_280--Hb_004007_070 Hb_002893_030 Hb_002893_030 Hb_000365_280--Hb_002893_030 Hb_005054_020 Hb_005054_020 Hb_000365_280--Hb_005054_020 Hb_000109_190 Hb_000109_190 Hb_000365_280--Hb_000109_190 Hb_002026_050 Hb_002026_050 Hb_000365_280--Hb_002026_050 Hb_000603_020 Hb_000603_020 Hb_003001_130--Hb_000603_020 Hb_000928_120 Hb_000928_120 Hb_003001_130--Hb_000928_120 Hb_000283_140 Hb_000283_140 Hb_003001_130--Hb_000283_140 Hb_004241_110 Hb_004241_110 Hb_003001_130--Hb_004241_110 Hb_000227_280 Hb_000227_280 Hb_003001_130--Hb_000227_280 Hb_000271_220 Hb_000271_220 Hb_003001_130--Hb_000271_220 Hb_002173_030--Hb_000365_280 Hb_017159_010 Hb_017159_010 Hb_002173_030--Hb_017159_010 Hb_049915_010 Hb_049915_010 Hb_002173_030--Hb_049915_010 Hb_000300_230 Hb_000300_230 Hb_002173_030--Hb_000300_230 Hb_001754_060 Hb_001754_060 Hb_002173_030--Hb_001754_060 Hb_000479_060--Hb_000109_190 Hb_001999_200 Hb_001999_200 Hb_000479_060--Hb_001999_200 Hb_005539_140 Hb_005539_140 Hb_000479_060--Hb_005539_140 Hb_002973_030 Hb_002973_030 Hb_000479_060--Hb_002973_030 Hb_081864_010 Hb_081864_010 Hb_000479_060--Hb_081864_010 Hb_000002_360 Hb_000002_360 Hb_003387_050--Hb_000002_360 Hb_080477_080 Hb_080477_080 Hb_003387_050--Hb_080477_080 Hb_003387_050--Hb_005054_020 Hb_000866_320 Hb_000866_320 Hb_003387_050--Hb_000866_320 Hb_120117_010 Hb_120117_010 Hb_003387_050--Hb_120117_010 Hb_003929_230--Hb_003001_130 Hb_001318_100 Hb_001318_100 Hb_003929_230--Hb_001318_100 Hb_005408_100 Hb_005408_100 Hb_003929_230--Hb_005408_100 Hb_000349_200 Hb_000349_200 Hb_003929_230--Hb_000349_200 Hb_003929_230--Hb_000109_190 Hb_003929_230--Hb_000603_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0254166 0.502095 0.269157 1.06071 0 0.107459
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0931181 0.0366208 0.0676967 0.16174 0.301079

CAGE analysis