Hb_002173_030

Information

Type -
Description -
Location Contig2173: 58116-58394
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP32005.1
description hypothetical protein JCGZ_12466 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KIA3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12466 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002173_030 0.0 - - hypothetical protein JCGZ_12466 [Jatropha curcas]
2 Hb_000365_280 0.1485490355 - - calcium binding protein/cast, putative [Ricinus communis]
3 Hb_001221_290 0.1517539546 - - hypothetical protein RCOM_1506010 [Ricinus communis]
4 Hb_017159_010 0.1560665598 - - -
5 Hb_049915_010 0.1576448116 - - PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]
6 Hb_000300_230 0.1622732908 - - PREDICTED: cation/calcium exchanger 2 [Jatropha curcas]
7 Hb_001754_060 0.1625191283 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
8 Hb_003849_190 0.1639817815 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
9 Hb_001472_140 0.1646370059 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
10 Hb_000109_190 0.1701150394 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
11 Hb_000740_090 0.1724444653 - - conserved hypothetical protein [Ricinus communis]
12 Hb_160405_010 0.1727532306 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
13 Hb_000424_030 0.1785377945 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000138_060 0.1812603768 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
15 Hb_000637_020 0.1820672306 - - PREDICTED: uncharacterized protein LOC105650669 [Jatropha curcas]
16 Hb_004449_090 0.1821718568 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
17 Hb_002289_150 0.1828121801 - - PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Jatropha curcas]
18 Hb_002849_070 0.1840488666 - - PREDICTED: protein BPS1, chloroplastic [Jatropha curcas]
19 Hb_000203_270 0.1858228223 - - alpha-xylosidase, putative [Ricinus communis]
20 Hb_006569_060 0.1865049579 - - plasma membrane intrinsic protein PIP2;3 [Hevea brasiliensis]

Gene co-expression network

sample Hb_002173_030 Hb_002173_030 Hb_000365_280 Hb_000365_280 Hb_002173_030--Hb_000365_280 Hb_001221_290 Hb_001221_290 Hb_002173_030--Hb_001221_290 Hb_017159_010 Hb_017159_010 Hb_002173_030--Hb_017159_010 Hb_049915_010 Hb_049915_010 Hb_002173_030--Hb_049915_010 Hb_000300_230 Hb_000300_230 Hb_002173_030--Hb_000300_230 Hb_001754_060 Hb_001754_060 Hb_002173_030--Hb_001754_060 Hb_000479_060 Hb_000479_060 Hb_000365_280--Hb_000479_060 Hb_004007_070 Hb_004007_070 Hb_000365_280--Hb_004007_070 Hb_002893_030 Hb_002893_030 Hb_000365_280--Hb_002893_030 Hb_005054_020 Hb_005054_020 Hb_000365_280--Hb_005054_020 Hb_000109_190 Hb_000109_190 Hb_000365_280--Hb_000109_190 Hb_002026_050 Hb_002026_050 Hb_000365_280--Hb_002026_050 Hb_001221_290--Hb_000365_280 Hb_003001_130 Hb_003001_130 Hb_001221_290--Hb_003001_130 Hb_001221_290--Hb_000479_060 Hb_003387_050 Hb_003387_050 Hb_001221_290--Hb_003387_050 Hb_003929_230 Hb_003929_230 Hb_001221_290--Hb_003929_230 Hb_002250_050 Hb_002250_050 Hb_017159_010--Hb_002250_050 Hb_017159_010--Hb_001754_060 Hb_000200_170 Hb_000200_170 Hb_017159_010--Hb_000200_170 Hb_001255_010 Hb_001255_010 Hb_017159_010--Hb_001255_010 Hb_002849_070 Hb_002849_070 Hb_017159_010--Hb_002849_070 Hb_001178_080 Hb_001178_080 Hb_017159_010--Hb_001178_080 Hb_000733_090 Hb_000733_090 Hb_049915_010--Hb_000733_090 Hb_008406_030 Hb_008406_030 Hb_049915_010--Hb_008406_030 Hb_004297_080 Hb_004297_080 Hb_049915_010--Hb_004297_080 Hb_008643_020 Hb_008643_020 Hb_049915_010--Hb_008643_020 Hb_000172_230 Hb_000172_230 Hb_049915_010--Hb_000172_230 Hb_002783_210 Hb_002783_210 Hb_049915_010--Hb_002783_210 Hb_000797_060 Hb_000797_060 Hb_000300_230--Hb_000797_060 Hb_002289_150 Hb_002289_150 Hb_000300_230--Hb_002289_150 Hb_000300_230--Hb_001754_060 Hb_004449_090 Hb_004449_090 Hb_000300_230--Hb_004449_090 Hb_000138_060 Hb_000138_060 Hb_000300_230--Hb_000138_060 Hb_005489_150 Hb_005489_150 Hb_000300_230--Hb_005489_150 Hb_001754_060--Hb_002289_150 Hb_003090_160 Hb_003090_160 Hb_001754_060--Hb_003090_160 Hb_000203_270 Hb_000203_270 Hb_001754_060--Hb_000203_270 Hb_001754_060--Hb_000797_060 Hb_000523_030 Hb_000523_030 Hb_001754_060--Hb_000523_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.28219 7.72001 4.86341 16.8448 0.779516 1.12195
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.26522 0.35762 0.976648 2.00161 2.639

CAGE analysis