Hb_001213_030

Information

Type -
Description -
Location Contig1213: 68996-70997
Sequence    

Annotation

kegg
ID tcc:TCM_021793
description PAR1 protein
nr
ID XP_007026832.1
description PAR1 protein [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061EYI9
description PAR1 protein OS=Theobroma cacao GN=TCM_021793 PE=4 SV=1
Gene Ontology
ID GO:0004386
description par1 protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001213_030 0.0 - - PAR1 protein [Theobroma cacao]
2 Hb_001357_060 0.1239731275 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 18-like [Cicer arietinum]
3 Hb_001951_230 0.1328962101 - - PREDICTED: phytochrome E isoform X2 [Jatropha curcas]
4 Hb_000659_040 0.1380069928 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
5 Hb_002838_010 0.1417538218 - - AGPase large subunit protein [Hevea brasiliensis]
6 Hb_000363_250 0.1419749404 - - PREDICTED: pirin-like protein [Malus domestica]
7 Hb_000120_090 0.142277806 - - PREDICTED: phosphoinositide phospholipase C 4-like [Jatropha curcas]
8 Hb_007894_070 0.1465234592 - - PREDICTED: uncharacterized protein LOC105632955 [Jatropha curcas]
9 Hb_000252_260 0.1469100129 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
10 Hb_006570_060 0.1513797477 - - PREDICTED: uncharacterized protein LOC105635332 [Jatropha curcas]
11 Hb_001102_200 0.154819278 - - PREDICTED: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Jatropha curcas]
12 Hb_006414_010 0.1548240602 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 9 [Jatropha curcas]
13 Hb_000215_290 0.1576202719 transcription factor TF Family: NAC PREDICTED: protein BEARSKIN2 isoform X2 [Jatropha curcas]
14 Hb_002835_280 0.157866377 - - PREDICTED: L-type lectin-domain containing receptor kinase S.1 [Jatropha curcas]
15 Hb_000210_040 0.1587776437 - - PREDICTED: putative HVA22-like protein g [Jatropha curcas]
16 Hb_089305_010 0.1589297873 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
17 Hb_000272_030 0.1595798966 - - PREDICTED: WD repeat-containing protein 76 isoform X1 [Jatropha curcas]
18 Hb_000069_690 0.1596131365 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF6 [Jatropha curcas]
19 Hb_001179_010 0.1624899655 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
20 Hb_004907_070 0.1626643114 - - PREDICTED: protein phosphatase 2C 37 [Jatropha curcas]

Gene co-expression network

sample Hb_001213_030 Hb_001213_030 Hb_001357_060 Hb_001357_060 Hb_001213_030--Hb_001357_060 Hb_001951_230 Hb_001951_230 Hb_001213_030--Hb_001951_230 Hb_000659_040 Hb_000659_040 Hb_001213_030--Hb_000659_040 Hb_002838_010 Hb_002838_010 Hb_001213_030--Hb_002838_010 Hb_000363_250 Hb_000363_250 Hb_001213_030--Hb_000363_250 Hb_000120_090 Hb_000120_090 Hb_001213_030--Hb_000120_090 Hb_002809_120 Hb_002809_120 Hb_001357_060--Hb_002809_120 Hb_001179_010 Hb_001179_010 Hb_001357_060--Hb_001179_010 Hb_002783_140 Hb_002783_140 Hb_001357_060--Hb_002783_140 Hb_003905_040 Hb_003905_040 Hb_001357_060--Hb_003905_040 Hb_000477_110 Hb_000477_110 Hb_001357_060--Hb_000477_110 Hb_000007_440 Hb_000007_440 Hb_001357_060--Hb_000007_440 Hb_000215_290 Hb_000215_290 Hb_001951_230--Hb_000215_290 Hb_000326_080 Hb_000326_080 Hb_001951_230--Hb_000326_080 Hb_004907_070 Hb_004907_070 Hb_001951_230--Hb_004907_070 Hb_001951_230--Hb_000363_250 Hb_005271_180 Hb_005271_180 Hb_001951_230--Hb_005271_180 Hb_001951_230--Hb_001357_060 Hb_003147_040 Hb_003147_040 Hb_000659_040--Hb_003147_040 Hb_000659_040--Hb_000363_250 Hb_000272_030 Hb_000272_030 Hb_000659_040--Hb_000272_030 Hb_001318_100 Hb_001318_100 Hb_000659_040--Hb_001318_100 Hb_000856_200 Hb_000856_200 Hb_000659_040--Hb_000856_200 Hb_007894_070 Hb_007894_070 Hb_000659_040--Hb_007894_070 Hb_000941_090 Hb_000941_090 Hb_002838_010--Hb_000941_090 Hb_002838_010--Hb_000272_030 Hb_001143_120 Hb_001143_120 Hb_002838_010--Hb_001143_120 Hb_001486_100 Hb_001486_100 Hb_002838_010--Hb_001486_100 Hb_000260_410 Hb_000260_410 Hb_002838_010--Hb_000260_410 Hb_002838_010--Hb_000659_040 Hb_000363_250--Hb_000215_290 Hb_144703_010 Hb_144703_010 Hb_000363_250--Hb_144703_010 Hb_000363_250--Hb_005271_180 Hb_000613_250 Hb_000613_250 Hb_000363_250--Hb_000613_250 Hb_089305_010 Hb_089305_010 Hb_000120_090--Hb_089305_010 Hb_000110_260 Hb_000110_260 Hb_000120_090--Hb_000110_260 Hb_001621_050 Hb_001621_050 Hb_000120_090--Hb_001621_050 Hb_001102_200 Hb_001102_200 Hb_000120_090--Hb_001102_200 Hb_000120_090--Hb_000272_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.101711 4.12986 3.00769 4.31848 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.474448 0.279594 0.160233 1.27026 3.54078

CAGE analysis