Hb_000724_030

Information

Type -
Description -
Location Contig724: 29643-31118
Sequence    

Annotation

kegg
ID rcu:RCOM_1460420
description hypothetical protein
nr
ID XP_012086085.1
description PREDICTED: uncharacterized protein LOC105645165 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQA8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22242 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55813: 29982-30087
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000724_030 0.0 - - PREDICTED: uncharacterized protein LOC105645165 [Jatropha curcas]
2 Hb_084858_010 0.2063795675 - - Uncharacterized protein isoform 3 [Theobroma cacao]
3 Hb_001014_130 0.2802516517 - - PREDICTED: uncharacterized protein LOC105647301 [Jatropha curcas]
4 Hb_000544_100 0.3033234262 - - hypothetical protein JCGZ_03636 [Jatropha curcas]
5 Hb_004648_010 0.3139769554 - - UDP-galactose/UDP-glucose transporter 4 [Morus notabilis]
6 Hb_002299_050 0.3151572417 - - PREDICTED: chalcone--flavonone isomerase isoform X1 [Pyrus x bretschneideri]
7 Hb_004724_120 0.3162401671 - - PREDICTED: ferredoxin, root R-B2 [Jatropha curcas]
8 Hb_178884_010 0.3168604226 - - putative disease resistance gene NBS-LRR family protein [Populus trichocarpa]
9 Hb_002019_010 0.3195892995 - - -
10 Hb_003929_060 0.3289755547 - - PREDICTED: uncharacterized protein ECU03_1610 [Jatropha curcas]
11 Hb_002333_030 0.329422726 - - -
12 Hb_003925_030 0.3339979959 - - conserved hypothetical protein [Ricinus communis]
13 Hb_012146_040 0.3421626182 - - PREDICTED: amino-acid permease BAT1 homolog [Jatropha curcas]
14 Hb_002477_220 0.3423829242 - - hypothetical protein POPTR_0017s06650g [Populus trichocarpa]
15 Hb_003124_090 0.3438722582 - - hypothetical protein CICLE_v10031194mg [Citrus clementina]
16 Hb_006769_010 0.3495648311 - - hypothetical protein JCGZ_00291 [Jatropha curcas]
17 Hb_000062_060 0.3498953597 transcription factor TF Family: Orphans multi-sensor hybrid histidine kinase [Plautia stali symbiont]
18 Hb_006588_030 0.3531006144 - - PREDICTED: cytochrome P450 CYP72A219-like [Jatropha curcas]
19 Hb_000021_100 0.3532852118 - - -
20 Hb_172572_010 0.3543224607 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]

Gene co-expression network

sample Hb_000724_030 Hb_000724_030 Hb_084858_010 Hb_084858_010 Hb_000724_030--Hb_084858_010 Hb_001014_130 Hb_001014_130 Hb_000724_030--Hb_001014_130 Hb_000544_100 Hb_000544_100 Hb_000724_030--Hb_000544_100 Hb_004648_010 Hb_004648_010 Hb_000724_030--Hb_004648_010 Hb_002299_050 Hb_002299_050 Hb_000724_030--Hb_002299_050 Hb_004724_120 Hb_004724_120 Hb_000724_030--Hb_004724_120 Hb_000062_060 Hb_000062_060 Hb_084858_010--Hb_000062_060 Hb_002232_150 Hb_002232_150 Hb_084858_010--Hb_002232_150 Hb_007846_040 Hb_007846_040 Hb_084858_010--Hb_007846_040 Hb_084858_010--Hb_004724_120 Hb_000270_210 Hb_000270_210 Hb_084858_010--Hb_000270_210 Hb_036702_010 Hb_036702_010 Hb_001014_130--Hb_036702_010 Hb_000424_150 Hb_000424_150 Hb_001014_130--Hb_000424_150 Hb_001014_130--Hb_000062_060 Hb_178884_010 Hb_178884_010 Hb_001014_130--Hb_178884_010 Hb_000732_170 Hb_000732_170 Hb_001014_130--Hb_000732_170 Hb_000221_120 Hb_000221_120 Hb_001014_130--Hb_000221_120 Hb_004462_010 Hb_004462_010 Hb_000544_100--Hb_004462_010 Hb_000209_110 Hb_000209_110 Hb_000544_100--Hb_000209_110 Hb_000544_100--Hb_004724_120 Hb_002477_220 Hb_002477_220 Hb_000544_100--Hb_002477_220 Hb_001636_020 Hb_001636_020 Hb_000544_100--Hb_001636_020 Hb_182680_010 Hb_182680_010 Hb_000544_100--Hb_182680_010 Hb_004648_010--Hb_004724_120 Hb_004648_010--Hb_084858_010 Hb_000415_070 Hb_000415_070 Hb_004648_010--Hb_000415_070 Hb_003925_030 Hb_003925_030 Hb_004648_010--Hb_003925_030 Hb_010534_050 Hb_010534_050 Hb_004648_010--Hb_010534_050 Hb_006769_010 Hb_006769_010 Hb_004648_010--Hb_006769_010 Hb_001587_010 Hb_001587_010 Hb_002299_050--Hb_001587_010 Hb_065525_030 Hb_065525_030 Hb_002299_050--Hb_065525_030 Hb_000984_050 Hb_000984_050 Hb_002299_050--Hb_000984_050 Hb_001278_070 Hb_001278_070 Hb_002299_050--Hb_001278_070 Hb_005273_040 Hb_005273_040 Hb_002299_050--Hb_005273_040 Hb_002407_080 Hb_002407_080 Hb_002299_050--Hb_002407_080 Hb_000733_270 Hb_000733_270 Hb_004724_120--Hb_000733_270 Hb_000130_060 Hb_000130_060 Hb_004724_120--Hb_000130_060 Hb_004724_120--Hb_001636_020 Hb_000679_200 Hb_000679_200 Hb_004724_120--Hb_000679_200 Hb_002666_020 Hb_002666_020 Hb_004724_120--Hb_002666_020 Hb_054885_020 Hb_054885_020 Hb_004724_120--Hb_054885_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.665674 0.0210098 0.0627569 0.305261 0.0589519 0.840078
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0377429 0 1.13719 0.0774498

CAGE analysis