Hb_000732_170

Information

Type -
Description -
Location Contig732: 185624-190555
Sequence    

Annotation

kegg
ID rcu:RCOM_1096290
description diphosphonucleoside phosphohydrolase, putative (EC:3.1.3.57)
nr
ID XP_012091478.1
description PREDICTED: putative PAP-specific phosphatase, mitochondrial isoform X1 [Jatropha curcas]
swissprot
ID Q9M0Y6
description Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1
trembl
ID B9SFC7
description Diphosphonucleoside phosphohydrolase, putative OS=Ricinus communis GN=RCOM_1096290 PE=4 SV=1
Gene Ontology
ID GO:0009507
description pap-specific mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56126: 188982-189290
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_170 0.0 - - PREDICTED: putative PAP-specific phosphatase, mitochondrial isoform X1 [Jatropha curcas]
2 Hb_000077_220 0.1748713391 - - PREDICTED: uncharacterized protein LOC105647046 [Jatropha curcas]
3 Hb_000284_100 0.1785444 - - PREDICTED: transcription factor GTE11 isoform X2 [Populus euphratica]
4 Hb_007333_030 0.1834791343 - - -
5 Hb_003471_020 0.1884889449 - - PREDICTED: ADP-ribosylation factor-like protein 8A [Jatropha curcas]
6 Hb_004770_050 0.1922580775 - - PREDICTED: serine carboxypeptidase-like 35 [Populus euphratica]
7 Hb_007456_040 0.1973140683 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
8 Hb_002814_060 0.2069423751 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
9 Hb_001504_040 0.2071373015 - - PREDICTED: factor of DNA methylation 1-like [Jatropha curcas]
10 Hb_001221_140 0.2072161113 - - DNA binding protein, putative [Ricinus communis]
11 Hb_001014_130 0.2130801837 - - PREDICTED: uncharacterized protein LOC105647301 [Jatropha curcas]
12 Hb_003097_080 0.2146892483 - - hypothetical protein JCGZ_24481 [Jatropha curcas]
13 Hb_002260_080 0.2159743794 - - Aldehyde dehydrogenase family 6 member B2 [Morus notabilis]
14 Hb_001508_020 0.2181645095 - - myosin vIII, putative [Ricinus communis]
15 Hb_002235_120 0.2190704374 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
16 Hb_004449_240 0.219208871 transcription factor TF Family: TCP PREDICTED: transcription factor TCP8 [Jatropha curcas]
17 Hb_012490_060 0.2195559711 - - PREDICTED: UBP1-associated proteins 1C isoform X1 [Jatropha curcas]
18 Hb_118840_030 0.2195696751 - - PREDICTED: vacuolar protein sorting-associated protein 18 homolog [Jatropha curcas]
19 Hb_183443_010 0.2237067019 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
20 Hb_001117_160 0.2247234377 - - PREDICTED: pentatricopeptide repeat-containing protein At1g10270 [Jatropha curcas]

Gene co-expression network

sample Hb_000732_170 Hb_000732_170 Hb_000077_220 Hb_000077_220 Hb_000732_170--Hb_000077_220 Hb_000284_100 Hb_000284_100 Hb_000732_170--Hb_000284_100 Hb_007333_030 Hb_007333_030 Hb_000732_170--Hb_007333_030 Hb_003471_020 Hb_003471_020 Hb_000732_170--Hb_003471_020 Hb_004770_050 Hb_004770_050 Hb_000732_170--Hb_004770_050 Hb_007456_040 Hb_007456_040 Hb_000732_170--Hb_007456_040 Hb_001221_140 Hb_001221_140 Hb_000077_220--Hb_001221_140 Hb_002814_060 Hb_002814_060 Hb_000077_220--Hb_002814_060 Hb_143960_010 Hb_143960_010 Hb_000077_220--Hb_143960_010 Hb_000599_170 Hb_000599_170 Hb_000077_220--Hb_000599_170 Hb_001508_020 Hb_001508_020 Hb_000077_220--Hb_001508_020 Hb_000106_020 Hb_000106_020 Hb_000077_220--Hb_000106_020 Hb_011310_160 Hb_011310_160 Hb_000284_100--Hb_011310_160 Hb_000470_080 Hb_000470_080 Hb_000284_100--Hb_000470_080 Hb_004117_100 Hb_004117_100 Hb_000284_100--Hb_004117_100 Hb_000284_120 Hb_000284_120 Hb_000284_100--Hb_000284_120 Hb_028912_040 Hb_028912_040 Hb_000284_100--Hb_028912_040 Hb_104812_010 Hb_104812_010 Hb_007333_030--Hb_104812_010 Hb_007333_030--Hb_001221_140 Hb_003059_010 Hb_003059_010 Hb_007333_030--Hb_003059_010 Hb_000574_360 Hb_000574_360 Hb_007333_030--Hb_000574_360 Hb_007333_030--Hb_000077_220 Hb_004040_040 Hb_004040_040 Hb_003471_020--Hb_004040_040 Hb_148131_010 Hb_148131_010 Hb_003471_020--Hb_148131_010 Hb_027136_010 Hb_027136_010 Hb_003471_020--Hb_027136_010 Hb_150346_010 Hb_150346_010 Hb_003471_020--Hb_150346_010 Hb_000424_150 Hb_000424_150 Hb_003471_020--Hb_000424_150 Hb_003471_020--Hb_002814_060 Hb_000221_120 Hb_000221_120 Hb_004770_050--Hb_000221_120 Hb_037793_010 Hb_037793_010 Hb_004770_050--Hb_037793_010 Hb_000579_060 Hb_000579_060 Hb_004770_050--Hb_000579_060 Hb_007456_010 Hb_007456_010 Hb_004770_050--Hb_007456_010 Hb_004770_050--Hb_003471_020 Hb_006478_060 Hb_006478_060 Hb_004770_050--Hb_006478_060 Hb_007456_040--Hb_000284_120 Hb_001504_040 Hb_001504_040 Hb_007456_040--Hb_001504_040 Hb_000365_030 Hb_000365_030 Hb_007456_040--Hb_000365_030 Hb_007456_040--Hb_002814_060 Hb_041828_010 Hb_041828_010 Hb_007456_040--Hb_041828_010 Hb_118840_030 Hb_118840_030 Hb_007456_040--Hb_118840_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.32964 0.641224 1.46548 1.1205 2.62393 2.92764
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.809448 2.20724 1.44135

CAGE analysis