Hb_001014_130

Information

Type -
Description -
Location Contig1014: 117191-118481
Sequence    

Annotation

kegg
ID pop:POPTR_0001s09760g
description POPTRDRAFT_815074; hypothetical protein
nr
ID XP_012088715.1
description PREDICTED: uncharacterized protein LOC105647301 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JH76
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23094 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001014_130 0.0 - - PREDICTED: uncharacterized protein LOC105647301 [Jatropha curcas]
2 Hb_036702_010 0.1474716669 - - phosphoprotein phosphatase, putative [Ricinus communis]
3 Hb_000424_150 0.2052329624 - - PREDICTED: copper transporter 5.1-like [Jatropha curcas]
4 Hb_000062_060 0.2069801229 transcription factor TF Family: Orphans multi-sensor hybrid histidine kinase [Plautia stali symbiont]
5 Hb_178884_010 0.2079514619 - - putative disease resistance gene NBS-LRR family protein [Populus trichocarpa]
6 Hb_000732_170 0.2130801837 - - PREDICTED: putative PAP-specific phosphatase, mitochondrial isoform X1 [Jatropha curcas]
7 Hb_000221_120 0.2191858565 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
8 Hb_000927_040 0.2234372579 - - -
9 Hb_001977_010 0.2243347919 - - PREDICTED: uncharacterized protein LOC105636485 isoform X2 [Jatropha curcas]
10 Hb_002814_060 0.2263385333 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
11 Hb_000021_030 0.2305574482 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
12 Hb_007456_040 0.2313938455 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
13 Hb_037793_010 0.2330702677 - - PREDICTED: microtubule-associated protein 70-2-like [Jatropha curcas]
14 Hb_028912_040 0.2330976807 - - hypothetical protein POPTR_0016s03250g [Populus trichocarpa]
15 Hb_003916_010 0.2332935768 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 13 [Jatropha curcas]
16 Hb_004987_070 0.2337625039 - - PREDICTED: heat shock 70 kDa protein 17-like isoform X1 [Jatropha curcas]
17 Hb_002742_070 0.2370198593 - - PREDICTED: villin-4-like [Jatropha curcas]
18 Hb_002299_050 0.2371297412 - - PREDICTED: chalcone--flavonone isomerase isoform X1 [Pyrus x bretschneideri]
19 Hb_008029_020 0.2438132929 - - PREDICTED: uncharacterized protein LOC105631777 [Jatropha curcas]
20 Hb_003471_020 0.2448660762 - - PREDICTED: ADP-ribosylation factor-like protein 8A [Jatropha curcas]

Gene co-expression network

sample Hb_001014_130 Hb_001014_130 Hb_036702_010 Hb_036702_010 Hb_001014_130--Hb_036702_010 Hb_000424_150 Hb_000424_150 Hb_001014_130--Hb_000424_150 Hb_000062_060 Hb_000062_060 Hb_001014_130--Hb_000062_060 Hb_178884_010 Hb_178884_010 Hb_001014_130--Hb_178884_010 Hb_000732_170 Hb_000732_170 Hb_001014_130--Hb_000732_170 Hb_000221_120 Hb_000221_120 Hb_001014_130--Hb_000221_120 Hb_001019_120 Hb_001019_120 Hb_036702_010--Hb_001019_120 Hb_002742_070 Hb_002742_070 Hb_036702_010--Hb_002742_070 Hb_011953_030 Hb_011953_030 Hb_036702_010--Hb_011953_030 Hb_000330_160 Hb_000330_160 Hb_036702_010--Hb_000330_160 Hb_036702_010--Hb_000062_060 Hb_074197_020 Hb_074197_020 Hb_000424_150--Hb_074197_020 Hb_002814_060 Hb_002814_060 Hb_000424_150--Hb_002814_060 Hb_002301_310 Hb_002301_310 Hb_000424_150--Hb_002301_310 Hb_000482_150 Hb_000482_150 Hb_000424_150--Hb_000482_150 Hb_003376_260 Hb_003376_260 Hb_000424_150--Hb_003376_260 Hb_003471_020 Hb_003471_020 Hb_000424_150--Hb_003471_020 Hb_037793_010 Hb_037793_010 Hb_000062_060--Hb_037793_010 Hb_005144_030 Hb_005144_030 Hb_000062_060--Hb_005144_030 Hb_000136_190 Hb_000136_190 Hb_000062_060--Hb_000136_190 Hb_011206_010 Hb_011206_010 Hb_000062_060--Hb_011206_010 Hb_001508_020 Hb_001508_020 Hb_000062_060--Hb_001508_020 Hb_002815_060 Hb_002815_060 Hb_000062_060--Hb_002815_060 Hb_178884_010--Hb_036702_010 Hb_000236_090 Hb_000236_090 Hb_178884_010--Hb_000236_090 Hb_003238_030 Hb_003238_030 Hb_178884_010--Hb_003238_030 Hb_002299_050 Hb_002299_050 Hb_178884_010--Hb_002299_050 Hb_009848_010 Hb_009848_010 Hb_178884_010--Hb_009848_010 Hb_000077_220 Hb_000077_220 Hb_000732_170--Hb_000077_220 Hb_000284_100 Hb_000284_100 Hb_000732_170--Hb_000284_100 Hb_007333_030 Hb_007333_030 Hb_000732_170--Hb_007333_030 Hb_000732_170--Hb_003471_020 Hb_004770_050 Hb_004770_050 Hb_000732_170--Hb_004770_050 Hb_007456_040 Hb_007456_040 Hb_000732_170--Hb_007456_040 Hb_006478_060 Hb_006478_060 Hb_000221_120--Hb_006478_060 Hb_004974_010 Hb_004974_010 Hb_000221_120--Hb_004974_010 Hb_000365_030 Hb_000365_030 Hb_000221_120--Hb_000365_030 Hb_001080_130 Hb_001080_130 Hb_000221_120--Hb_001080_130 Hb_001675_070 Hb_001675_070 Hb_000221_120--Hb_001675_070 Hb_001977_010 Hb_001977_010 Hb_000221_120--Hb_001977_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.71867 0.293732 0.501862 0.85633 0.960178 2.86063
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0717718 0.0564304 0.20326 2.17348 1.12738

CAGE analysis