Hb_000679_060

Information

Type -
Description -
Location Contig679: 56092-58730
Sequence    

Annotation

kegg
ID rcu:RCOM_0924410
description ADP,ATP carrier protein, putative
nr
ID XP_002515534.1
description ADP,ATP carrier protein, putative [Ricinus communis]
swissprot
ID Q9SUV1
description Adenine nucleotide transporter BT1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1
trembl
ID B9RP65
description ADP,ATP carrier protein, putative OS=Ricinus communis GN=RCOM_0924410 PE=3 SV=1
Gene Ontology
ID GO:0009941
description adenine nucleotide transporter chloroplastic mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53674: 57674-57835
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000679_060 0.0 - - ADP,ATP carrier protein, putative [Ricinus communis]
2 Hb_002217_510 0.1080033297 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002338_020 0.1285566034 - - PREDICTED: serine/arginine-rich splicing factor SR34A [Jatropha curcas]
4 Hb_000589_260 0.1321652258 - - 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis]
5 Hb_007423_040 0.1393295807 - - PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Jatropha curcas]
6 Hb_017002_020 0.1393419955 - - PREDICTED: uncharacterized protein LOC105650411 [Jatropha curcas]
7 Hb_000010_250 0.1409442114 - - PREDICTED: protein tipD [Jatropha curcas]
8 Hb_000111_210 0.141189576 - - PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Jatropha curcas]
9 Hb_000109_090 0.1420378893 - - PREDICTED: deoxyhypusine hydroxylase [Jatropha curcas]
10 Hb_002234_140 0.142183942 - - DNA-directed RNA polymerase II family protein [Populus trichocarpa]
11 Hb_007576_080 0.1432318579 - - PREDICTED: uncharacterized protein LOC105643972 [Jatropha curcas]
12 Hb_004355_030 0.1438636881 - - fumarylacetoacetate hydrolase, putative [Ricinus communis]
13 Hb_002542_040 0.1458644221 - - hypothetical protein JCGZ_13884 [Jatropha curcas]
14 Hb_000286_070 0.1469943165 - - PREDICTED: 60S ribosomal protein L13-1-like [Jatropha curcas]
15 Hb_001810_030 0.1477773913 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
16 Hb_002346_010 0.1482868396 - - -
17 Hb_008103_070 0.1493653107 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 4-like [Jatropha curcas]
18 Hb_000563_230 0.1495922479 - - phospholipase d zeta, putative [Ricinus communis]
19 Hb_012753_170 0.149990186 - - PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like isoform X2 [Jatropha curcas]
20 Hb_142368_010 0.1526450886 - - mRNA (guanine-7-)methyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000679_060 Hb_000679_060 Hb_002217_510 Hb_002217_510 Hb_000679_060--Hb_002217_510 Hb_002338_020 Hb_002338_020 Hb_000679_060--Hb_002338_020 Hb_000589_260 Hb_000589_260 Hb_000679_060--Hb_000589_260 Hb_007423_040 Hb_007423_040 Hb_000679_060--Hb_007423_040 Hb_017002_020 Hb_017002_020 Hb_000679_060--Hb_017002_020 Hb_000010_250 Hb_000010_250 Hb_000679_060--Hb_000010_250 Hb_000111_210 Hb_000111_210 Hb_002217_510--Hb_000111_210 Hb_002217_510--Hb_007423_040 Hb_000227_090 Hb_000227_090 Hb_002217_510--Hb_000227_090 Hb_011909_120 Hb_011909_120 Hb_002217_510--Hb_011909_120 Hb_008103_070 Hb_008103_070 Hb_002217_510--Hb_008103_070 Hb_000563_230 Hb_000563_230 Hb_002217_510--Hb_000563_230 Hb_000836_170 Hb_000836_170 Hb_002338_020--Hb_000836_170 Hb_002110_230 Hb_002110_230 Hb_002338_020--Hb_002110_230 Hb_000245_220 Hb_000245_220 Hb_002338_020--Hb_000245_220 Hb_008642_040 Hb_008642_040 Hb_002338_020--Hb_008642_040 Hb_007163_070 Hb_007163_070 Hb_002338_020--Hb_007163_070 Hb_007533_010 Hb_007533_010 Hb_002338_020--Hb_007533_010 Hb_001427_110 Hb_001427_110 Hb_000589_260--Hb_001427_110 Hb_000589_260--Hb_007423_040 Hb_001534_050 Hb_001534_050 Hb_000589_260--Hb_001534_050 Hb_000172_640 Hb_000172_640 Hb_000589_260--Hb_000172_640 Hb_002192_010 Hb_002192_010 Hb_000589_260--Hb_002192_010 Hb_002486_040 Hb_002486_040 Hb_000589_260--Hb_002486_040 Hb_005730_120 Hb_005730_120 Hb_007423_040--Hb_005730_120 Hb_007576_080 Hb_007576_080 Hb_007423_040--Hb_007576_080 Hb_007423_040--Hb_002192_010 Hb_000152_500 Hb_000152_500 Hb_007423_040--Hb_000152_500 Hb_027472_040 Hb_027472_040 Hb_007423_040--Hb_027472_040 Hb_001534_120 Hb_001534_120 Hb_007423_040--Hb_001534_120 Hb_002820_110 Hb_002820_110 Hb_017002_020--Hb_002820_110 Hb_000510_330 Hb_000510_330 Hb_017002_020--Hb_000510_330 Hb_000444_080 Hb_000444_080 Hb_017002_020--Hb_000444_080 Hb_002045_040 Hb_002045_040 Hb_017002_020--Hb_002045_040 Hb_017002_020--Hb_001534_050 Hb_002876_240 Hb_002876_240 Hb_017002_020--Hb_002876_240 Hb_001089_020 Hb_001089_020 Hb_000010_250--Hb_001089_020 Hb_000457_100 Hb_000457_100 Hb_000010_250--Hb_000457_100 Hb_001481_090 Hb_001481_090 Hb_000010_250--Hb_001481_090 Hb_004453_040 Hb_004453_040 Hb_000010_250--Hb_004453_040 Hb_003752_080 Hb_003752_080 Hb_000010_250--Hb_003752_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.51986 3.11184 3.74252 1.14497 5.13681 1.57429
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.46121 5.03874 1.2011 3.81768 2.20466

CAGE analysis