Hb_000656_030

Information

Type -
Description -
Location Contig656: 20149-20902
Sequence    

Annotation

kegg
ID rcu:RCOM_0684710
description hypothetical protein
nr
ID XP_002529184.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9ST65
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0684710 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000656_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000103_410 0.1840938794 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
3 Hb_006717_010 0.1845675391 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
4 Hb_001195_250 0.1950692308 - - lrr receptor protein kinase, putative [Ricinus communis]
5 Hb_000215_230 0.196166387 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
6 Hb_000042_060 0.1984832249 - - PREDICTED: uncharacterized protein LOC105632794 [Jatropha curcas]
7 Hb_004032_490 0.2020710155 - - PREDICTED: uncharacterized protein LOC100853401 [Vitis vinifera]
8 Hb_003125_130 0.2050439678 - - hypothetical protein JCGZ_26446 [Jatropha curcas]
9 Hb_000251_050 0.2053284712 - - hypothetical protein JCGZ_21678 [Jatropha curcas]
10 Hb_003579_010 0.2096187593 - - cryptochrome 1.2 [Populus tremula]
11 Hb_129230_010 0.2150560484 - - PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 1-like [Nicotiana sylvestris]
12 Hb_000589_420 0.2153253263 - - PREDICTED: uncharacterized protein LOC105647273 [Jatropha curcas]
13 Hb_001269_520 0.2172536172 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
14 Hb_000748_110 0.2227156499 - - Glycosyltransferase QUASIMODO1, putative [Ricinus communis]
15 Hb_010050_040 0.223800525 - - PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]
16 Hb_027337_060 0.2239599924 - - -
17 Hb_003702_070 0.226391369 - - unnamed protein product [Vitis vinifera]
18 Hb_000816_160 0.22658552 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
19 Hb_006185_040 0.2267346251 - - PREDICTED: verprolin [Jatropha curcas]
20 Hb_000753_150 0.2272342682 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.4 [Jatropha curcas]

Gene co-expression network

sample Hb_000656_030 Hb_000656_030 Hb_000103_410 Hb_000103_410 Hb_000656_030--Hb_000103_410 Hb_006717_010 Hb_006717_010 Hb_000656_030--Hb_006717_010 Hb_001195_250 Hb_001195_250 Hb_000656_030--Hb_001195_250 Hb_000215_230 Hb_000215_230 Hb_000656_030--Hb_000215_230 Hb_000042_060 Hb_000042_060 Hb_000656_030--Hb_000042_060 Hb_004032_490 Hb_004032_490 Hb_000656_030--Hb_004032_490 Hb_001689_030 Hb_001689_030 Hb_000103_410--Hb_001689_030 Hb_000103_410--Hb_001195_250 Hb_002344_080 Hb_002344_080 Hb_000103_410--Hb_002344_080 Hb_003177_090 Hb_003177_090 Hb_000103_410--Hb_003177_090 Hb_025045_010 Hb_025045_010 Hb_000103_410--Hb_025045_010 Hb_002809_120 Hb_002809_120 Hb_000103_410--Hb_002809_120 Hb_006717_010--Hb_001195_250 Hb_000567_240 Hb_000567_240 Hb_006717_010--Hb_000567_240 Hb_006717_010--Hb_000103_410 Hb_002006_060 Hb_002006_060 Hb_006717_010--Hb_002006_060 Hb_000589_420 Hb_000589_420 Hb_006717_010--Hb_000589_420 Hb_001948_090 Hb_001948_090 Hb_006717_010--Hb_001948_090 Hb_000753_150 Hb_000753_150 Hb_001195_250--Hb_000753_150 Hb_001195_250--Hb_003177_090 Hb_001269_520 Hb_001269_520 Hb_001195_250--Hb_001269_520 Hb_000251_050 Hb_000251_050 Hb_001195_250--Hb_000251_050 Hb_024066_040 Hb_024066_040 Hb_000215_230--Hb_024066_040 Hb_000215_230--Hb_001195_250 Hb_000574_320 Hb_000574_320 Hb_000215_230--Hb_000574_320 Hb_003786_010 Hb_003786_010 Hb_000215_230--Hb_003786_010 Hb_000069_500 Hb_000069_500 Hb_000215_230--Hb_000069_500 Hb_000891_010 Hb_000891_010 Hb_000215_230--Hb_000891_010 Hb_006422_020 Hb_006422_020 Hb_000042_060--Hb_006422_020 Hb_167775_010 Hb_167775_010 Hb_000042_060--Hb_167775_010 Hb_002374_550 Hb_002374_550 Hb_000042_060--Hb_002374_550 Hb_000042_060--Hb_001269_520 Hb_000042_060--Hb_000251_050 Hb_000071_160 Hb_000071_160 Hb_000042_060--Hb_000071_160 Hb_027337_060 Hb_027337_060 Hb_004032_490--Hb_027337_060 Hb_004032_490--Hb_002344_080 Hb_000816_160 Hb_000816_160 Hb_004032_490--Hb_000816_160 Hb_004032_490--Hb_001689_030 Hb_004032_490--Hb_000103_410 Hb_000230_450 Hb_000230_450 Hb_004032_490--Hb_000230_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0714129 0.398036 0.226293 0.336016 0.139439 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.055832 0.478302

CAGE analysis