Hb_000579_050

Information

Type -
Description -
Location Contig579: 104868-106235
Sequence    

Annotation

kegg
ID rcu:RCOM_1595740
description Peroxidase 9 precursor, putative (EC:1.11.1.7)
nr
ID XP_012071934.1
description PREDICTED: peroxidase 9 [Jatropha curcas]
swissprot
ID Q96512
description Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1
trembl
ID B9R800
description Peroxidase OS=Ricinus communis GN=RCOM_1595740 PE=3 SV=1
Gene Ontology
ID GO:0016491
description peroxidase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49765: 99369-104052 , PASA_asmbl_49766: 99620-104052 , PASA_asmbl_49767: 99621-104052 , PASA_asmbl_49768: 105119-105698
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000579_050 0.0 - - PREDICTED: peroxidase 9 [Jatropha curcas]
2 Hb_000985_070 0.3129143773 - - PREDICTED: uncharacterized protein LOC105647984 [Jatropha curcas]
3 Hb_003799_020 0.3129467155 - - hypothetical protein VITISV_003261 [Vitis vinifera]
4 Hb_002232_090 0.3182880033 - - STS14 protein precursor, putative [Ricinus communis]
5 Hb_000302_210 0.3186784121 - - conserved hypothetical protein [Ricinus communis]
6 Hb_012760_020 0.3226931587 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
7 Hb_003747_110 0.3351276211 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 1 [Jatropha curcas]
8 Hb_001649_120 0.3407951882 - - -
9 Hb_012754_020 0.3455514515 - - PREDICTED: uncharacterized protein LOC104229837 [Nicotiana sylvestris]
10 Hb_000304_060 0.3486835544 transcription factor TF Family: GRAS hypothetical protein POPTR_0010s15360g [Populus trichocarpa]
11 Hb_012522_010 0.3668371865 - - hypothetical protein VITISV_003261 [Vitis vinifera]
12 Hb_098785_010 0.3695014794 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
13 Hb_135008_010 0.3736817473 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
14 Hb_002498_040 0.3800663364 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]
15 Hb_006472_070 0.3818445323 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
16 Hb_003992_230 0.3845386845 - - PREDICTED: uncharacterized protein LOC105634858 [Jatropha curcas]
17 Hb_000980_070 0.3867940018 - - PREDICTED: uncharacterized protein LOC103440883 [Malus domestica]
18 Hb_001221_280 0.3898666738 - - -
19 Hb_059379_020 0.3918078057 - - PREDICTED: caffeic acid 3-O-methyltransferase 1-like [Populus euphratica]
20 Hb_005656_030 0.3918622507 transcription factor TF Family: MYB-related r2r3-myb transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000579_050 Hb_000579_050 Hb_000985_070 Hb_000985_070 Hb_000579_050--Hb_000985_070 Hb_003799_020 Hb_003799_020 Hb_000579_050--Hb_003799_020 Hb_002232_090 Hb_002232_090 Hb_000579_050--Hb_002232_090 Hb_000302_210 Hb_000302_210 Hb_000579_050--Hb_000302_210 Hb_012760_020 Hb_012760_020 Hb_000579_050--Hb_012760_020 Hb_003747_110 Hb_003747_110 Hb_000579_050--Hb_003747_110 Hb_164162_010 Hb_164162_010 Hb_000985_070--Hb_164162_010 Hb_012754_020 Hb_012754_020 Hb_000985_070--Hb_012754_020 Hb_000985_070--Hb_000302_210 Hb_000125_220 Hb_000125_220 Hb_000985_070--Hb_000125_220 Hb_014068_020 Hb_014068_020 Hb_000985_070--Hb_014068_020 Hb_098785_010 Hb_098785_010 Hb_000985_070--Hb_098785_010 Hb_003799_020--Hb_003747_110 Hb_003799_020--Hb_000302_210 Hb_001221_280 Hb_001221_280 Hb_003799_020--Hb_001221_280 Hb_001008_140 Hb_001008_140 Hb_003799_020--Hb_001008_140 Hb_003799_020--Hb_098785_010 Hb_006788_080 Hb_006788_080 Hb_003799_020--Hb_006788_080 Hb_003992_230 Hb_003992_230 Hb_002232_090--Hb_003992_230 Hb_002498_040 Hb_002498_040 Hb_002232_090--Hb_002498_040 Hb_001691_030 Hb_001691_030 Hb_002232_090--Hb_001691_030 Hb_135008_010 Hb_135008_010 Hb_002232_090--Hb_135008_010 Hb_005539_250 Hb_005539_250 Hb_002232_090--Hb_005539_250 Hb_000302_210--Hb_012754_020 Hb_000302_210--Hb_098785_010 Hb_000302_210--Hb_000125_220 Hb_000925_040 Hb_000925_040 Hb_000302_210--Hb_000925_040 Hb_012522_010 Hb_012522_010 Hb_012760_020--Hb_012522_010 Hb_000108_170 Hb_000108_170 Hb_012760_020--Hb_000108_170 Hb_000980_070 Hb_000980_070 Hb_012760_020--Hb_000980_070 Hb_163837_010 Hb_163837_010 Hb_012760_020--Hb_163837_010 Hb_000304_060 Hb_000304_060 Hb_012760_020--Hb_000304_060 Hb_000000_100 Hb_000000_100 Hb_012760_020--Hb_000000_100 Hb_003747_110--Hb_006788_080 Hb_000042_370 Hb_000042_370 Hb_003747_110--Hb_000042_370 Hb_000220_140 Hb_000220_140 Hb_003747_110--Hb_000220_140 Hb_003747_110--Hb_000302_210 Hb_003747_110--Hb_000985_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0450336 0.0755698 0 0.0229417 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0807885 0.0889431 0

CAGE analysis