Hb_135008_010

Information

Type -
Description -
Location Contig135008: 7-506
Sequence    

Annotation

kegg
ID sot:102590755
description uncharacterized LOC102590755
nr
ID XP_012066659.1
description PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1T8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00233 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135008_010 0.0 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
2 Hb_043623_020 0.2902501573 - - hypothetical protein JCGZ_17692 [Jatropha curcas]
3 Hb_002232_090 0.3017974478 - - STS14 protein precursor, putative [Ricinus communis]
4 Hb_007125_010 0.3021515415 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
5 Hb_006683_010 0.3112799138 - - cell wall invertase [Manihot esculenta]
6 Hb_054362_010 0.3151492437 - - PREDICTED: uncharacterized protein LOC105650428 [Jatropha curcas]
7 Hb_008779_010 0.3169393653 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
8 Hb_000012_040 0.3206012116 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2-like [Populus euphratica]
9 Hb_008643_010 0.3207956164 - - hypothetical protein JCGZ_04298 [Jatropha curcas]
10 Hb_001221_280 0.322141989 - - -
11 Hb_127993_010 0.3224361511 - - PREDICTED: choline monooxygenase, chloroplastic isoform X4 [Jatropha curcas]
12 Hb_000455_100 0.3243541274 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_018464_060 0.3269906526 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_000876_040 0.333146951 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]
15 Hb_169574_010 0.3414347821 - - PREDICTED: uncharacterized protein LOC104120373 [Nicotiana tomentosiformis]
16 Hb_048874_010 0.3425930566 - - hypothetical protein POPTR_0016s10870g [Populus trichocarpa]
17 Hb_005799_040 0.3455030004 - - PREDICTED: bidirectional sugar transporter SWEET4-like isoform X1 [Gossypium raimondii]
18 Hb_008246_050 0.3455246857 - - -
19 Hb_026048_060 0.3457406075 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
20 Hb_000143_020 0.3465827489 - - PREDICTED: isoflavone 2'-hydroxylase-like [Jatropha curcas]

Gene co-expression network

sample Hb_135008_010 Hb_135008_010 Hb_043623_020 Hb_043623_020 Hb_135008_010--Hb_043623_020 Hb_002232_090 Hb_002232_090 Hb_135008_010--Hb_002232_090 Hb_007125_010 Hb_007125_010 Hb_135008_010--Hb_007125_010 Hb_006683_010 Hb_006683_010 Hb_135008_010--Hb_006683_010 Hb_054362_010 Hb_054362_010 Hb_135008_010--Hb_054362_010 Hb_008779_010 Hb_008779_010 Hb_135008_010--Hb_008779_010 Hb_001143_260 Hb_001143_260 Hb_043623_020--Hb_001143_260 Hb_001221_280 Hb_001221_280 Hb_043623_020--Hb_001221_280 Hb_000876_040 Hb_000876_040 Hb_043623_020--Hb_000876_040 Hb_002513_050 Hb_002513_050 Hb_043623_020--Hb_002513_050 Hb_009615_080 Hb_009615_080 Hb_043623_020--Hb_009615_080 Hb_000184_200 Hb_000184_200 Hb_043623_020--Hb_000184_200 Hb_003992_230 Hb_003992_230 Hb_002232_090--Hb_003992_230 Hb_002498_040 Hb_002498_040 Hb_002232_090--Hb_002498_040 Hb_001691_030 Hb_001691_030 Hb_002232_090--Hb_001691_030 Hb_005539_250 Hb_005539_250 Hb_002232_090--Hb_005539_250 Hb_000579_050 Hb_000579_050 Hb_002232_090--Hb_000579_050 Hb_007125_010--Hb_009615_080 Hb_007125_010--Hb_006683_010 Hb_092995_020 Hb_092995_020 Hb_007125_010--Hb_092995_020 Hb_127993_010 Hb_127993_010 Hb_007125_010--Hb_127993_010 Hb_007125_010--Hb_054362_010 Hb_169574_010 Hb_169574_010 Hb_007125_010--Hb_169574_010 Hb_002675_120 Hb_002675_120 Hb_006683_010--Hb_002675_120 Hb_000050_130 Hb_000050_130 Hb_006683_010--Hb_000050_130 Hb_001652_110 Hb_001652_110 Hb_006683_010--Hb_001652_110 Hb_006683_010--Hb_008779_010 Hb_008643_010 Hb_008643_010 Hb_006683_010--Hb_008643_010 Hb_000160_100 Hb_000160_100 Hb_006683_010--Hb_000160_100 Hb_054362_010--Hb_127993_010 Hb_054362_010--Hb_169574_010 Hb_048874_010 Hb_048874_010 Hb_054362_010--Hb_048874_010 Hb_005799_040 Hb_005799_040 Hb_054362_010--Hb_005799_040 Hb_008246_050 Hb_008246_050 Hb_054362_010--Hb_008246_050 Hb_162126_010 Hb_162126_010 Hb_054362_010--Hb_162126_010 Hb_008779_010--Hb_008643_010 Hb_001638_220 Hb_001638_220 Hb_008779_010--Hb_001638_220 Hb_008779_010--Hb_054362_010 Hb_000455_100 Hb_000455_100 Hb_008779_010--Hb_000455_100 Hb_008779_010--Hb_127993_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.134842 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.254617 0.411113 0

CAGE analysis