Hb_000568_060

Information

Type -
Description -
Location Contig568: 88534-90259
Sequence    

Annotation

kegg
ID pmum:103332367
description uncharacterized LOC103332367
nr
ID XP_012093259.1
description PREDICTED: uncharacterized protein LOC105650906 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L7D8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20046 PE=4 SV=1
Gene Ontology
ID GO:0016746
description acyl- n-acyltransferases superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000568_060 0.0 - - PREDICTED: uncharacterized protein LOC105650906 [Jatropha curcas]
2 Hb_000029_080 0.1485296548 - - PREDICTED: cold-inducible RNA-binding protein B-like [Jatropha curcas]
3 Hb_002092_120 0.1522183374 - - PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Jatropha curcas]
4 Hb_002686_190 0.1602443364 - - -
5 Hb_000950_070 0.1605963071 - - PREDICTED: uncharacterized protein LOC105645259 isoform X2 [Jatropha curcas]
6 Hb_003848_040 0.165078984 - - PREDICTED: phosphatidylinositol-glycan biosynthesis class X protein isoform X1 [Jatropha curcas]
7 Hb_003020_210 0.1652081774 - - Structural maintenance of chromosomes 2-2 -like protein [Gossypium arboreum]
8 Hb_000422_030 0.1653625081 - - PREDICTED: uncharacterized protein LOC105643943 [Jatropha curcas]
9 Hb_177215_040 0.1666048628 - - PREDICTED: DET1- and DDB1-associated protein 1 isoform X1 [Jatropha curcas]
10 Hb_004117_190 0.1687301086 - - PREDICTED: uncharacterized protein LOC105649109 [Jatropha curcas]
11 Hb_004129_090 0.169781261 - - PREDICTED: uncharacterized protein LOC105646039 [Jatropha curcas]
12 Hb_007741_130 0.1708288559 - - hypothetical protein B456_007G089000 [Gossypium raimondii]
13 Hb_001517_050 0.1710024601 transcription factor TF Family: BBR-BPC conserved hypothetical protein [Ricinus communis]
14 Hb_002471_250 0.1712011293 - - Tapt1/CMV receptor, putative isoform 2 [Theobroma cacao]
15 Hb_000300_260 0.1729009805 - - PREDICTED: replication factor C subunit 3 [Jatropha curcas]
16 Hb_000035_160 0.1732131737 - - PREDICTED: formin-like protein 18 [Jatropha curcas]
17 Hb_158144_010 0.1735109602 - - -
18 Hb_014497_100 0.1738798029 - - PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
19 Hb_000359_150 0.174229525 - - PREDICTED: protein Mpv17-like isoform X1 [Jatropha curcas]
20 Hb_001623_100 0.1749103851 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000568_060 Hb_000568_060 Hb_000029_080 Hb_000029_080 Hb_000568_060--Hb_000029_080 Hb_002092_120 Hb_002092_120 Hb_000568_060--Hb_002092_120 Hb_002686_190 Hb_002686_190 Hb_000568_060--Hb_002686_190 Hb_000950_070 Hb_000950_070 Hb_000568_060--Hb_000950_070 Hb_003848_040 Hb_003848_040 Hb_000568_060--Hb_003848_040 Hb_003020_210 Hb_003020_210 Hb_000568_060--Hb_003020_210 Hb_005211_180 Hb_005211_180 Hb_000029_080--Hb_005211_180 Hb_177215_040 Hb_177215_040 Hb_000029_080--Hb_177215_040 Hb_000045_300 Hb_000045_300 Hb_000029_080--Hb_000045_300 Hb_000164_100 Hb_000164_100 Hb_000029_080--Hb_000164_100 Hb_000029_080--Hb_002686_190 Hb_008225_090 Hb_008225_090 Hb_002092_120--Hb_008225_090 Hb_000300_260 Hb_000300_260 Hb_002092_120--Hb_000300_260 Hb_000176_020 Hb_000176_020 Hb_002092_120--Hb_000176_020 Hb_002893_040 Hb_002893_040 Hb_002092_120--Hb_002893_040 Hb_002572_020 Hb_002572_020 Hb_002092_120--Hb_002572_020 Hb_000270_470 Hb_000270_470 Hb_002092_120--Hb_000270_470 Hb_003207_180 Hb_003207_180 Hb_002686_190--Hb_003207_180 Hb_007101_300 Hb_007101_300 Hb_002686_190--Hb_007101_300 Hb_005489_060 Hb_005489_060 Hb_002686_190--Hb_005489_060 Hb_007878_010 Hb_007878_010 Hb_002686_190--Hb_007878_010 Hb_006588_170 Hb_006588_170 Hb_002686_190--Hb_006588_170 Hb_000032_380 Hb_000032_380 Hb_002686_190--Hb_000032_380 Hb_002471_250 Hb_002471_250 Hb_000950_070--Hb_002471_250 Hb_001396_210 Hb_001396_210 Hb_000950_070--Hb_001396_210 Hb_000215_090 Hb_000215_090 Hb_000950_070--Hb_000215_090 Hb_027792_010 Hb_027792_010 Hb_000950_070--Hb_027792_010 Hb_001517_050 Hb_001517_050 Hb_000950_070--Hb_001517_050 Hb_158144_010 Hb_158144_010 Hb_000950_070--Hb_158144_010 Hb_001105_170 Hb_001105_170 Hb_003848_040--Hb_001105_170 Hb_012565_070 Hb_012565_070 Hb_003848_040--Hb_012565_070 Hb_012340_090 Hb_012340_090 Hb_003848_040--Hb_012340_090 Hb_003848_040--Hb_003207_180 Hb_003848_040--Hb_000300_260 Hb_001472_100 Hb_001472_100 Hb_003848_040--Hb_001472_100 Hb_010368_050 Hb_010368_050 Hb_003020_210--Hb_010368_050 Hb_000123_270 Hb_000123_270 Hb_003020_210--Hb_000123_270 Hb_083380_020 Hb_083380_020 Hb_003020_210--Hb_083380_020 Hb_000539_050 Hb_000539_050 Hb_003020_210--Hb_000539_050 Hb_003020_210--Hb_000215_090 Hb_005000_330 Hb_005000_330 Hb_003020_210--Hb_005000_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.4672 2.70698 7.16399 4.40764 0.579386 3.70548
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.15798 4.93736 0.985149 1.19187 1.63684

CAGE analysis