Hb_000322_160

Information

Type transcription factor
Description TF Family: HSF
Location Contig322: 164223-166373
Sequence    

Annotation

kegg
ID rcu:RCOM_1047180
description Heat shock factor protein HSF30, putative
nr
ID XP_012076960.1
description PREDICTED: heat stress transcription factor A-2-like [Jatropha curcas]
swissprot
ID P41152
description Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1
trembl
ID A0A067KPW6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07430 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat stress transcription factor a-2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34055: 164849-165281 , PASA_asmbl_34056: 165326-166019
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000322_160 0.0 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-2-like [Jatropha curcas]
2 Hb_004201_040 0.0770882589 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
3 Hb_002374_200 0.1403994706 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
4 Hb_000134_260 0.1562890216 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
5 Hb_001541_190 0.1723458659 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
6 Hb_000567_330 0.1726950124 - - PREDICTED: probable metal-nicotianamine transporter YSL7 [Jatropha curcas]
7 Hb_001307_020 0.1771936085 - - electron carrier, putative [Ricinus communis]
8 Hb_003058_030 0.1793747807 - - calcium-dependent protein kinase, putative [Ricinus communis]
9 Hb_000905_100 0.1843614619 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like isoform X1 [Jatropha curcas]
10 Hb_189208_060 0.1863687987 - - PREDICTED: two-pore potassium channel 5 [Jatropha curcas]
11 Hb_000438_200 0.1879729845 - - PREDICTED: protein NRT1/ PTR FAMILY 5.1 [Jatropha curcas]
12 Hb_001951_210 0.1886332849 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004970_070 0.1887271206 - - hypothetical protein POPTR_0002s12620g [Populus trichocarpa]
14 Hb_000071_090 0.191729045 - - PREDICTED: probable protein phosphatase 2C 4 [Jatropha curcas]
15 Hb_003038_110 0.1921944436 - - hypothetical protein JCGZ_14961 [Jatropha curcas]
16 Hb_000454_080 0.1924910862 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
17 Hb_003688_220 0.1930987701 - - unknown [Populus trichocarpa]
18 Hb_002217_190 0.1947236326 - - invertase [Hevea brasiliensis]
19 Hb_011794_050 0.196018504 - - transcription factor, putative [Ricinus communis]
20 Hb_001633_160 0.1966553039 - - PREDICTED: zerumbone synthase-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000322_160 Hb_000322_160 Hb_004201_040 Hb_004201_040 Hb_000322_160--Hb_004201_040 Hb_002374_200 Hb_002374_200 Hb_000322_160--Hb_002374_200 Hb_000134_260 Hb_000134_260 Hb_000322_160--Hb_000134_260 Hb_001541_190 Hb_001541_190 Hb_000322_160--Hb_001541_190 Hb_000567_330 Hb_000567_330 Hb_000322_160--Hb_000567_330 Hb_001307_020 Hb_001307_020 Hb_000322_160--Hb_001307_020 Hb_004201_040--Hb_000567_330 Hb_033006_020 Hb_033006_020 Hb_004201_040--Hb_033006_020 Hb_004201_040--Hb_001307_020 Hb_000905_100 Hb_000905_100 Hb_004201_040--Hb_000905_100 Hb_000243_290 Hb_000243_290 Hb_004201_040--Hb_000243_290 Hb_002400_020 Hb_002400_020 Hb_002374_200--Hb_002400_020 Hb_004551_010 Hb_004551_010 Hb_002374_200--Hb_004551_010 Hb_002374_200--Hb_000134_260 Hb_000454_080 Hb_000454_080 Hb_002374_200--Hb_000454_080 Hb_001660_080 Hb_001660_080 Hb_002374_200--Hb_001660_080 Hb_004712_090 Hb_004712_090 Hb_000134_260--Hb_004712_090 Hb_000134_260--Hb_004551_010 Hb_003688_220 Hb_003688_220 Hb_000134_260--Hb_003688_220 Hb_011918_030 Hb_011918_030 Hb_000134_260--Hb_011918_030 Hb_000035_140 Hb_000035_140 Hb_000134_260--Hb_000035_140 Hb_000069_300 Hb_000069_300 Hb_001541_190--Hb_000069_300 Hb_001541_190--Hb_001307_020 Hb_003667_020 Hb_003667_020 Hb_001541_190--Hb_003667_020 Hb_000175_300 Hb_000175_300 Hb_001541_190--Hb_000175_300 Hb_001638_120 Hb_001638_120 Hb_001541_190--Hb_001638_120 Hb_004970_070 Hb_004970_070 Hb_001541_190--Hb_004970_070 Hb_089305_010 Hb_089305_010 Hb_000567_330--Hb_089305_010 Hb_007130_020 Hb_007130_020 Hb_000567_330--Hb_007130_020 Hb_000567_330--Hb_033006_020 Hb_004899_110 Hb_004899_110 Hb_000567_330--Hb_004899_110 Hb_000836_090 Hb_000836_090 Hb_000567_330--Hb_000836_090 Hb_010812_060 Hb_010812_060 Hb_000567_330--Hb_010812_060 Hb_004223_080 Hb_004223_080 Hb_001307_020--Hb_004223_080 Hb_000027_160 Hb_000027_160 Hb_001307_020--Hb_000027_160 Hb_001828_110 Hb_001828_110 Hb_001307_020--Hb_001828_110 Hb_001307_020--Hb_000905_100 Hb_000809_130 Hb_000809_130 Hb_001307_020--Hb_000809_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0115173 0.857311 1.86495 0.771794 0 0.011267
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0262016 0.20615 0.0389403 0.0246388 0.433817

CAGE analysis