Hb_000281_160

Information

Type -
Description -
Location Contig281: 202863-204256
Sequence    

Annotation

kegg
ID gmx:100778750
description cytochrome P450 716B2-like
nr
ID XP_006585214.1
description PREDICTED: cytochrome P450 716B2-like isoform X2 [Glycine max]
swissprot
ID I7C6E8
description Beta-amyrin 28-oxidase OS=Panax ginseng PE=2 SV=1
trembl
ID K7L692
description Uncharacterized protein OS=Glycine max PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 716b2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000281_160 0.0 - - PREDICTED: cytochrome P450 716B2-like isoform X2 [Glycine max]
2 Hb_000275_020 0.2993728784 - - PREDICTED: uncharacterized protein LOC105632656 [Jatropha curcas]
3 Hb_005489_010 0.3029679477 - - hypothetical protein POPTR_0011s11420g [Populus trichocarpa]
4 Hb_002025_210 0.3187816248 - - -
5 Hb_000670_030 0.3221603775 - - -
6 Hb_000253_030 0.3294234894 - - hypothetical protein JCGZ_23039 [Jatropha curcas]
7 Hb_060715_010 0.3350730848 - - PREDICTED: notchless protein homolog [Gossypium raimondii]
8 Hb_150766_020 0.335618201 - - hypothetical protein VITISV_030841 [Vitis vinifera]
9 Hb_002344_120 0.3406988163 - - -
10 Hb_000373_190 0.3433291052 - - -
11 Hb_004195_230 0.3530065747 - - conserved hypothetical protein [Ricinus communis]
12 Hb_006629_010 0.3554398827 - - Glutathione S-transferase 2 isoform 3 [Theobroma cacao]
13 Hb_005843_130 0.3585122148 - - hypothetical protein JCGZ_12389 [Jatropha curcas]
14 Hb_004846_100 0.3590964172 - - Na(+)/H(+) antiporter, putative [Ricinus communis]
15 Hb_179812_010 0.3618899674 - - TdcA1-ORF1-ORF2 [Daucus carota]
16 Hb_003551_010 0.3621359962 - - hypothetical protein CISIN_1g030786mg [Citrus sinensis]
17 Hb_155541_010 0.3631444717 - - -
18 Hb_005271_020 0.3650093428 - - PREDICTED: glutathione S-transferase T1-like [Jatropha curcas]
19 Hb_001864_030 0.365091946 - - thioredoxin h [Hevea brasiliensis]
20 Hb_003266_040 0.3681390118 - - PREDICTED: 6.7 kDa chloroplast outer envelope membrane protein-like [Jatropha curcas]

Gene co-expression network

sample Hb_000281_160 Hb_000281_160 Hb_000275_020 Hb_000275_020 Hb_000281_160--Hb_000275_020 Hb_005489_010 Hb_005489_010 Hb_000281_160--Hb_005489_010 Hb_002025_210 Hb_002025_210 Hb_000281_160--Hb_002025_210 Hb_000670_030 Hb_000670_030 Hb_000281_160--Hb_000670_030 Hb_000253_030 Hb_000253_030 Hb_000281_160--Hb_000253_030 Hb_060715_010 Hb_060715_010 Hb_000281_160--Hb_060715_010 Hb_000275_020--Hb_060715_010 Hb_006788_120 Hb_006788_120 Hb_000275_020--Hb_006788_120 Hb_012120_030 Hb_012120_030 Hb_000275_020--Hb_012120_030 Hb_023732_060 Hb_023732_060 Hb_000275_020--Hb_023732_060 Hb_000010_210 Hb_000010_210 Hb_000275_020--Hb_000010_210 Hb_000224_200 Hb_000224_200 Hb_000275_020--Hb_000224_200 Hb_005489_010--Hb_002025_210 Hb_002344_120 Hb_002344_120 Hb_005489_010--Hb_002344_120 Hb_000665_110 Hb_000665_110 Hb_005489_010--Hb_000665_110 Hb_000562_060 Hb_000562_060 Hb_005489_010--Hb_000562_060 Hb_150766_020 Hb_150766_020 Hb_005489_010--Hb_150766_020 Hb_001233_020 Hb_001233_020 Hb_005489_010--Hb_001233_020 Hb_002025_210--Hb_002344_120 Hb_000994_110 Hb_000994_110 Hb_002025_210--Hb_000994_110 Hb_002025_210--Hb_000665_110 Hb_013492_010 Hb_013492_010 Hb_002025_210--Hb_013492_010 Hb_002025_210--Hb_150766_020 Hb_027428_030 Hb_027428_030 Hb_000670_030--Hb_027428_030 Hb_030619_010 Hb_030619_010 Hb_000670_030--Hb_030619_010 Hb_021576_060 Hb_021576_060 Hb_000670_030--Hb_021576_060 Hb_000373_190 Hb_000373_190 Hb_000670_030--Hb_000373_190 Hb_000275_040 Hb_000275_040 Hb_000670_030--Hb_000275_040 Hb_000670_030--Hb_000253_030 Hb_010068_100 Hb_010068_100 Hb_000253_030--Hb_010068_100 Hb_163599_010 Hb_163599_010 Hb_000253_030--Hb_163599_010 Hb_136765_010 Hb_136765_010 Hb_000253_030--Hb_136765_010 Hb_155541_010 Hb_155541_010 Hb_000253_030--Hb_155541_010 Hb_003551_010 Hb_003551_010 Hb_000253_030--Hb_003551_010 Hb_008667_040 Hb_008667_040 Hb_000253_030--Hb_008667_040 Hb_005143_040 Hb_005143_040 Hb_060715_010--Hb_005143_040 Hb_000416_070 Hb_000416_070 Hb_060715_010--Hb_000416_070 Hb_000003_540 Hb_000003_540 Hb_060715_010--Hb_000003_540 Hb_012760_130 Hb_012760_130 Hb_060715_010--Hb_012760_130 Hb_184570_010 Hb_184570_010 Hb_060715_010--Hb_184570_010 Hb_003994_270 Hb_003994_270 Hb_060715_010--Hb_003994_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.349112 0 1.26186 0.815135 0.475998
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.18228 0.310584 0 0.144455 0

CAGE analysis