Hb_000094_250

Information

Type -
Description -
Location Contig94: 195887-197699
Sequence    

Annotation

kegg
ID rcu:RCOM_1593970
description hypothetical protein
nr
ID XP_012071823.1
description PREDICTED: uncharacterized protein LOC105633774 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L310
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04414 PE=4 SV=1
Gene Ontology
ID GO:0050896
description sugar isoform partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63109: 195835-197729
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_250 0.0 - - PREDICTED: uncharacterized protein LOC105633774 isoform X3 [Jatropha curcas]
2 Hb_000009_140 0.1348697419 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
3 Hb_033234_010 0.1373540392 desease resistance Gene Name: LRR_8 Disease resistance protein RPP8 [Theobroma cacao]
4 Hb_000062_490 0.137505701 - - PREDICTED: lipoxygenase 6, chloroplastic [Jatropha curcas]
5 Hb_000094_120 0.1396195428 - - PREDICTED: uncharacterized protein At1g01500 [Jatropha curcas]
6 Hb_000120_310 0.1412999811 - - Gibberellin 3-beta-dioxygenase, putative [Ricinus communis]
7 Hb_001123_190 0.1432140502 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Jatropha curcas]
8 Hb_033363_010 0.1459351173 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
9 Hb_000072_020 0.1497230227 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Jatropha curcas]
10 Hb_000567_350 0.1535145063 - - PREDICTED: probable acyl-activating enzyme 6 [Jatropha curcas]
11 Hb_000363_410 0.1582221922 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
12 Hb_000111_370 0.1586373874 - - PREDICTED: cation/H(+) antiporter 2-like [Jatropha curcas]
13 Hb_000254_010 0.1613378909 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
14 Hb_048476_040 0.1617774383 - - PREDICTED: uncharacterized protein LOC104611656 [Nelumbo nucifera]
15 Hb_001856_170 0.162099852 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
16 Hb_000840_070 0.1621369803 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
17 Hb_003470_050 0.1641485662 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
18 Hb_000735_140 0.167150264 - - 3-glucanase family protein [Populus trichocarpa]
19 Hb_000056_280 0.1691310019 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
20 Hb_005504_030 0.1696089778 - - PREDICTED: somatic embryogenesis receptor kinase 2-like [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_000094_250 Hb_000094_250 Hb_000009_140 Hb_000009_140 Hb_000094_250--Hb_000009_140 Hb_033234_010 Hb_033234_010 Hb_000094_250--Hb_033234_010 Hb_000062_490 Hb_000062_490 Hb_000094_250--Hb_000062_490 Hb_000094_120 Hb_000094_120 Hb_000094_250--Hb_000094_120 Hb_000120_310 Hb_000120_310 Hb_000094_250--Hb_000120_310 Hb_001123_190 Hb_001123_190 Hb_000094_250--Hb_001123_190 Hb_005504_030 Hb_005504_030 Hb_000009_140--Hb_005504_030 Hb_004586_240 Hb_004586_240 Hb_000009_140--Hb_004586_240 Hb_033363_010 Hb_033363_010 Hb_000009_140--Hb_033363_010 Hb_000072_020 Hb_000072_020 Hb_000009_140--Hb_000072_020 Hb_009646_010 Hb_009646_010 Hb_000009_140--Hb_009646_010 Hb_010068_070 Hb_010068_070 Hb_000009_140--Hb_010068_070 Hb_042202_020 Hb_042202_020 Hb_033234_010--Hb_042202_020 Hb_002833_020 Hb_002833_020 Hb_033234_010--Hb_002833_020 Hb_000085_380 Hb_000085_380 Hb_033234_010--Hb_000085_380 Hb_033234_010--Hb_000072_020 Hb_132840_030 Hb_132840_030 Hb_033234_010--Hb_132840_030 Hb_033234_010--Hb_000120_310 Hb_000692_030 Hb_000692_030 Hb_000062_490--Hb_000692_030 Hb_012727_010 Hb_012727_010 Hb_000062_490--Hb_012727_010 Hb_000062_490--Hb_000094_120 Hb_001178_080 Hb_001178_080 Hb_000062_490--Hb_001178_080 Hb_006615_160 Hb_006615_160 Hb_000062_490--Hb_006615_160 Hb_068576_010 Hb_068576_010 Hb_000094_120--Hb_068576_010 Hb_002030_180 Hb_002030_180 Hb_000094_120--Hb_002030_180 Hb_000094_120--Hb_006615_160 Hb_005539_260 Hb_005539_260 Hb_000094_120--Hb_005539_260 Hb_001856_170 Hb_001856_170 Hb_000120_310--Hb_001856_170 Hb_001369_160 Hb_001369_160 Hb_000120_310--Hb_001369_160 Hb_001488_280 Hb_001488_280 Hb_000120_310--Hb_001488_280 Hb_001596_020 Hb_001596_020 Hb_000120_310--Hb_001596_020 Hb_000120_310--Hb_002833_020 Hb_000120_310--Hb_004586_240 Hb_004032_090 Hb_004032_090 Hb_001123_190--Hb_004032_090 Hb_110558_010 Hb_110558_010 Hb_001123_190--Hb_110558_010 Hb_048476_040 Hb_048476_040 Hb_001123_190--Hb_048476_040 Hb_012366_050 Hb_012366_050 Hb_001123_190--Hb_012366_050 Hb_026698_020 Hb_026698_020 Hb_001123_190--Hb_026698_020 Hb_083078_010 Hb_083078_010 Hb_001123_190--Hb_083078_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.20583 30.4332 23.842 27.1028 3.01295 2.13279
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.08262 0.701082 8.91205 24.8542 8.6819

CAGE analysis