Hb_000061_350

Information

Type -
Description -
Location Contig61: 308525-310344
Sequence    

Annotation

kegg
ID rcu:RCOM_1470980
description hypothetical protein
nr
ID XP_002514710.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID O48724
description Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 OS=Arabidopsis thaliana GN=WEB1 PE=1 SV=1
trembl
ID B9RLU1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1470980 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000061_350 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_003963_020 0.1830213032 - - PREDICTED: uncharacterized protein LOC100256672 [Vitis vinifera]
3 Hb_003209_030 0.2322852517 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
4 Hb_000107_370 0.2387654607 - - PREDICTED: uncharacterized protein At2g17340-like isoform X1 [Jatropha curcas]
5 Hb_048197_010 0.247819994 - - -
6 Hb_035905_010 0.2511103034 - - PREDICTED: uncharacterized protein LOC105627956 [Jatropha curcas]
7 Hb_002301_240 0.2526814275 - - auxin-repressed protein-like protein ARP1 [Manihot esculenta]
8 Hb_008983_010 0.2570023608 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
9 Hb_002918_280 0.2576118465 - - hypothetical protein POPTR_0004s04800g [Populus trichocarpa]
10 Hb_001184_100 0.2578847805 - - PREDICTED: zinc finger protein 4-like [Populus euphratica]
11 Hb_070820_010 0.2601864162 - - hypothetical protein B456_008G232800 [Gossypium raimondii]
12 Hb_004449_010 0.2650938846 - - lipase [Ricinus communis]
13 Hb_004718_020 0.266623487 - - Potassium channel KAT3, putative [Ricinus communis]
14 Hb_003312_010 0.2677520415 - - PREDICTED: uncharacterized protein LOC104428797 [Eucalyptus grandis]
15 Hb_012052_060 0.2731967447 - - hypothetical protein POPTR_0018s10190g [Populus trichocarpa]
16 Hb_084934_010 0.2735818477 - - hypothetical protein JCGZ_22225 [Jatropha curcas]
17 Hb_011472_040 0.2736036047 - - PREDICTED: clathrin light chain 3 [Jatropha curcas]
18 Hb_036369_010 0.2737270142 - - -
19 Hb_006189_010 0.2785829106 - - -
20 Hb_170305_020 0.2791200922 - - hypothetical protein JCGZ_23578 [Jatropha curcas]

Gene co-expression network

sample Hb_000061_350 Hb_000061_350 Hb_003963_020 Hb_003963_020 Hb_000061_350--Hb_003963_020 Hb_003209_030 Hb_003209_030 Hb_000061_350--Hb_003209_030 Hb_000107_370 Hb_000107_370 Hb_000061_350--Hb_000107_370 Hb_048197_010 Hb_048197_010 Hb_000061_350--Hb_048197_010 Hb_035905_010 Hb_035905_010 Hb_000061_350--Hb_035905_010 Hb_002301_240 Hb_002301_240 Hb_000061_350--Hb_002301_240 Hb_001959_300 Hb_001959_300 Hb_003963_020--Hb_001959_300 Hb_003963_020--Hb_000107_370 Hb_003963_020--Hb_048197_010 Hb_004691_040 Hb_004691_040 Hb_003963_020--Hb_004691_040 Hb_003312_010 Hb_003312_010 Hb_003963_020--Hb_003312_010 Hb_000331_320 Hb_000331_320 Hb_003209_030--Hb_000331_320 Hb_008667_050 Hb_008667_050 Hb_003209_030--Hb_008667_050 Hb_000453_210 Hb_000453_210 Hb_003209_030--Hb_000453_210 Hb_000529_240 Hb_000529_240 Hb_003209_030--Hb_000529_240 Hb_001495_060 Hb_001495_060 Hb_003209_030--Hb_001495_060 Hb_001047_140 Hb_001047_140 Hb_003209_030--Hb_001047_140 Hb_000163_200 Hb_000163_200 Hb_000107_370--Hb_000163_200 Hb_030565_070 Hb_030565_070 Hb_000107_370--Hb_030565_070 Hb_003751_120 Hb_003751_120 Hb_000107_370--Hb_003751_120 Hb_054301_010 Hb_054301_010 Hb_000107_370--Hb_054301_010 Hb_031403_010 Hb_031403_010 Hb_000107_370--Hb_031403_010 Hb_007409_020 Hb_007409_020 Hb_000107_370--Hb_007409_020 Hb_036369_010 Hb_036369_010 Hb_048197_010--Hb_036369_010 Hb_170305_020 Hb_170305_020 Hb_048197_010--Hb_170305_020 Hb_001248_020 Hb_001248_020 Hb_048197_010--Hb_001248_020 Hb_002821_010 Hb_002821_010 Hb_048197_010--Hb_002821_010 Hb_077562_040 Hb_077562_040 Hb_048197_010--Hb_077562_040 Hb_023675_010 Hb_023675_010 Hb_048197_010--Hb_023675_010 Hb_035905_010--Hb_004691_040 Hb_000260_450 Hb_000260_450 Hb_035905_010--Hb_000260_450 Hb_003992_120 Hb_003992_120 Hb_035905_010--Hb_003992_120 Hb_004116_110 Hb_004116_110 Hb_035905_010--Hb_004116_110 Hb_001141_400 Hb_001141_400 Hb_035905_010--Hb_001141_400 Hb_019033_010 Hb_019033_010 Hb_002301_240--Hb_019033_010 Hb_000086_330 Hb_000086_330 Hb_002301_240--Hb_000086_330 Hb_025246_010 Hb_025246_010 Hb_002301_240--Hb_025246_010 Hb_056196_070 Hb_056196_070 Hb_002301_240--Hb_056196_070 Hb_002835_220 Hb_002835_220 Hb_002301_240--Hb_002835_220 Hb_070820_010 Hb_070820_010 Hb_002301_240--Hb_070820_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0925172 0.0287962 0 0 0.100904 0.0622375
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.158536 0.0831559 0 0.0828293 0

CAGE analysis