Hb_003751_120

Information

Type -
Description -
Location Contig3751: 125855-126437
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003751_120 0.0 - - -
2 Hb_031403_010 0.0901100171 - - hypothetical protein POPTR_0001s40140g [Populus trichocarpa]
3 Hb_000304_020 0.1148074398 - - beta-1,3-glucanase form RRII Gln 3 [Hevea brasiliensis]
4 Hb_030765_020 0.12185313 - - ABC transporter family protein [Hevea brasiliensis]
5 Hb_005618_040 0.1222326485 - - -
6 Hb_025087_010 0.1238258289 - - PREDICTED: RING-H2 finger protein ATL56 [Jatropha curcas]
7 Hb_000085_300 0.1272726728 - - -
8 Hb_002298_040 0.1285103843 - - PREDICTED: uncharacterized protein LOC105633642 [Jatropha curcas]
9 Hb_008695_190 0.1306461762 transcription factor TF Family: ARF PREDICTED: auxin response factor 17 [Jatropha curcas]
10 Hb_000284_010 0.130996639 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_04974 [Jatropha curcas]
11 Hb_000193_230 0.1312170931 - - PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Jatropha curcas]
12 Hb_001999_120 0.1316165197 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]
13 Hb_060668_010 0.1337708831 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
14 Hb_009026_050 0.1338988823 - - vacuolar ATPase F subunit [Hevea brasiliensis]
15 Hb_000107_370 0.1347277337 - - PREDICTED: uncharacterized protein At2g17340-like isoform X1 [Jatropha curcas]
16 Hb_000107_650 0.13760664 - - PREDICTED: cyclic phosphodiesterase-like [Jatropha curcas]
17 Hb_183963_020 0.1380944588 - - PREDICTED: uncharacterized protein LOC105644615 [Jatropha curcas]
18 Hb_001722_040 0.1388113059 - - PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A-like [Jatropha curcas]
19 Hb_005867_040 0.1402733215 transcription factor TF Family: RWP-RK PREDICTED: protein RKD4 [Jatropha curcas]
20 Hb_005016_130 0.1410528475 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]

Gene co-expression network

sample Hb_003751_120 Hb_003751_120 Hb_031403_010 Hb_031403_010 Hb_003751_120--Hb_031403_010 Hb_000304_020 Hb_000304_020 Hb_003751_120--Hb_000304_020 Hb_030765_020 Hb_030765_020 Hb_003751_120--Hb_030765_020 Hb_005618_040 Hb_005618_040 Hb_003751_120--Hb_005618_040 Hb_025087_010 Hb_025087_010 Hb_003751_120--Hb_025087_010 Hb_000085_300 Hb_000085_300 Hb_003751_120--Hb_000085_300 Hb_031403_010--Hb_000304_020 Hb_001514_190 Hb_001514_190 Hb_031403_010--Hb_001514_190 Hb_005867_040 Hb_005867_040 Hb_031403_010--Hb_005867_040 Hb_009026_050 Hb_009026_050 Hb_031403_010--Hb_009026_050 Hb_000809_040 Hb_000809_040 Hb_031403_010--Hb_000809_040 Hb_000849_040 Hb_000849_040 Hb_000304_020--Hb_000849_040 Hb_114684_020 Hb_114684_020 Hb_000304_020--Hb_114684_020 Hb_001366_220 Hb_001366_220 Hb_000304_020--Hb_001366_220 Hb_006787_040 Hb_006787_040 Hb_000304_020--Hb_006787_040 Hb_005245_090 Hb_005245_090 Hb_000304_020--Hb_005245_090 Hb_000143_050 Hb_000143_050 Hb_030765_020--Hb_000143_050 Hb_012799_060 Hb_012799_060 Hb_030765_020--Hb_012799_060 Hb_000078_030 Hb_000078_030 Hb_030765_020--Hb_000078_030 Hb_060668_010 Hb_060668_010 Hb_030765_020--Hb_060668_010 Hb_001741_080 Hb_001741_080 Hb_030765_020--Hb_001741_080 Hb_000580_170 Hb_000580_170 Hb_030765_020--Hb_000580_170 Hb_000261_460 Hb_000261_460 Hb_005618_040--Hb_000261_460 Hb_007666_020 Hb_007666_020 Hb_005618_040--Hb_007666_020 Hb_005618_040--Hb_025087_010 Hb_001153_200 Hb_001153_200 Hb_005618_040--Hb_001153_200 Hb_000051_040 Hb_000051_040 Hb_005618_040--Hb_000051_040 Hb_000922_270 Hb_000922_270 Hb_005618_040--Hb_000922_270 Hb_183963_020 Hb_183963_020 Hb_025087_010--Hb_183963_020 Hb_001366_230 Hb_001366_230 Hb_025087_010--Hb_001366_230 Hb_008695_190 Hb_008695_190 Hb_025087_010--Hb_008695_190 Hb_025087_010--Hb_009026_050 Hb_001722_040 Hb_001722_040 Hb_025087_010--Hb_001722_040 Hb_005000_290 Hb_005000_290 Hb_025087_010--Hb_005000_290 Hb_000085_300--Hb_183963_020 Hb_002387_060 Hb_002387_060 Hb_000085_300--Hb_002387_060 Hb_000085_300--Hb_025087_010 Hb_000032_220 Hb_000032_220 Hb_000085_300--Hb_000032_220 Hb_007021_020 Hb_007021_020 Hb_000085_300--Hb_007021_020 Hb_000085_300--Hb_001722_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.4789 2.6876 0 0.143149 14.5491 14.9527
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
30.2769 20.8811 15.2108 7.49911 0.62129

CAGE analysis